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rifcsplowo2_01_scaffold_3500

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_3500_1
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

91..450
DNA (360bp) protein (120aa)
hypothetical protein
Putative uncharacterized protein id=4759182 bin=PER_GWC2_41_7 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
Putative uncharacterized protein Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsplowo2_01_scaffold_3500_2
unknown

Not on your lists

comp(501..1118)
DNA (618bp) protein (206aa)

This feature has no annotations

rifcsplowo2_01_scaffold_3500_3
unknown

Not on your lists

comp(1286..1924)
DNA (639bp) protein (213aa)

This feature has no annotations

rifcsplowo2_01_scaffold_3500_4
Methanococcoides burtonii, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(1921..2874)
DNA (954bp) protein (318aa)
seryl-tRNA synthetase (EC:6.1.1.11)
Type-2 serine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_01278}; EC=6.1.1.11 {ECO:0000255|HAMAP-Rule:MF_01278};; Seryl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_01278}; Short=SerRS {ECO:0000255|HAMAP-Ru
hypothetical protein n=1 Tax=Streptomyces sp. LaPpAH-108 RepID=UPI00036F8754
rifcsplowo2_01_scaffold_3500_5
R_OD1_Nomurabacteria_46_18, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(2965..3165)
DNA (201bp) protein (67aa)
transmembrane_regions Tax=RIFCSPLOWO2_01_FULL_OD1_Nomurabacteria_46_18_curated
transmembrane_regions id=5044093 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rifcsplowo2_01_scaffold_3500_6
unknown

Not on your lists

comp(3278..3598)
DNA (321bp) protein (107aa)

This feature has no annotations

rifcsplowo2_01_scaffold_3500_7
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(3592..4128)
DNA (537bp) protein (179aa)
hypothetical protein
Putative uncharacterized protein id=5041716 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Putative uncharacterized protein Tax=AR4
rifcsplowo2_01_scaffold_3500_8
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(4129..4614)
DNA (486bp) protein (162aa)
hypothetical protein
seg id=5041715 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
seg Tax=AR4
rifcsplowo2_01_scaffold_3500_9
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(4611..5072)
DNA (462bp) protein (154aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037E987E
hypothetical protein Tax=CG_Pacearch_06
hypothetical protein
rifcsplowo2_01_scaffold_3500_10
unknown

Not on your lists

comp(5077..5313)
DNA (237bp) protein (79aa)

This feature has no annotations

rifcsplowo2_01_scaffold_3500_11

Not on your lists

comp(5300..5986)
DNA (687bp) protein (229aa)
hypothetical protein
id=5045883 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46228.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsplowo2_01_scaffold_3500_12
R_RIF_OD1_06_39_25, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(6247..6525)
DNA (279bp) protein (93aa)
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_06_39_25_curated
hypothetical protein id=5048621 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
putative transcriptional regulator
rifcsplowo2_01_scaffold_3500_13

Not on your lists

comp(6522..7181)
DNA (660bp) protein (220aa)
id=5045884 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46229.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsplowo2_01_scaffold_3500_14
unknown

Not on your lists

7329..7466
DNA (138bp) protein (46aa)

This feature has no annotations

rifcsplowo2_01_scaffold_3500_15
unknown

Not on your lists

7483..7848
DNA (366bp) protein (122aa)

This feature has no annotations

rifcsplowo2_01_scaffold_3500_16
GWA2_OP11_nov_40_9, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

7932..8141
DNA (210bp) protein (70aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KKR82810.1}; TaxID=1618424 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA2_40_9.;"
hypothetical protein; K08982 putative membrane protein id=5090642 bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
rifcsplowo2_01_scaffold_3500_17
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

8214..8381
DNA (168bp) protein (56aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036FABAB
Tax=AR9
rifcsplowo2_01_scaffold_3500_18
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

8359..8802
DNA (444bp) protein (148aa)
hypothetical protein
seg id=5041713 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR9
rifcsplowo2_01_scaffold_3500_19

Not on your lists

8795..9307
DNA (513bp) protein (171aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO49668.1}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
PROKAR_LIPOPROTEIN id=5800408 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsplowo2_01_scaffold_3500_20
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

9310..9813
DNA (504bp) protein (168aa)
"Winged helix" DNA-binding domain id=5800418 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein Tax=AR9
MarR family transcriptional regulator
rifcsplowo2_01_scaffold_3500_21
Bacillus coagulans, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9945..10142
DNA (198bp) protein (66aa)
Copper ion binding protein n=1 Tax=Bacillus coagulans 36D1 RepID=G2TLW1_BACCO
copZ; copper chaperone CopZ
Copper chaperone CopZ {ECO:0000313|EMBL:AJH79131.1}; TaxID=1121088 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus coagulans DSM 1 = ATCC 7050.;"
rifcsplowo2_01_scaffold_3500_22
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

10139..11056
DNA (918bp) protein (306aa)
hypothetical protein id=5041917 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein Tax=AR4
Heavy metal transport/detoxification protein
rifcsplowo2_01_scaffold_3500_23

Not on your lists

11061..11465
DNA (405bp) protein (135aa)
hypothetical protein id=5041918 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Uncharacterized protein {ECO:0000313|EMBL:KHO47346.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
hypothetical protein
rifcsplowo2_01_scaffold_3500_24

Not on your lists

11462..13621
DNA (2160bp) protein (720aa)
copper-translocating P-type ATPase; K01533 Cu2+-exporting ATPase [EC:3.6.3.4] id=5041922 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Cu2+-exporting ATPase {ECO:0000313|EMBL:KHO47350.1}; EC=3.6.3.4 {ECO:0000313|EMBL:KHO47350.1};; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
hypothetical protein
rifcsplowo2_01_scaffold_3500_25
CG_Micra_05, Micraarchaeota, Archaea

Not on your lists

13681..14379
DNA (699bp) protein (233aa)
hypothetical protein
transmembrane_regions Tax=CG_Micra_05
id=5046296 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsplowo2_01_scaffold_3500_26
RIFOXYD2_FULL_RIF_OD1_02_43_21_curated, RIF-OD1-2, Parcubacteria, Bacteria

Not on your lists

14586..15263
DNA (678bp) protein (226aa)
Carbohydrate kinase, YjeF related protein n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=B8D0W0_HALOH
hypothetical protein Tax=RIFOXYD2_FULL_RIF_OD1_02_43_21_curated
carbohydrate kinase
rifcsplowo2_01_scaffold_3500_27
RBG_13_Deltaproteobacteria_52_11b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15485..16564
DNA (1080bp) protein (360aa)
pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha (EC:1.2.4.1); K00161 pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] Tax=RBG_13_Deltaproteobacteria_52_11b_curate
pyruvate dehydrogenase (EC:1.2.4.1)
Pyruvate dehydrogenase (Acetyl-transferring) n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TMN9_ALKMQ rbh
rifcsplowo2_01_scaffold_3500_28
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16557..17522
DNA (966bp) protein (322aa)
Pyruvate dehydrogenase E1 component subunit beta n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2DH73_9FIRM
Pyruvate dehydrogenase E1 component subunit beta {ECO:0000313|EMBL:ERI95683.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876
transketolase, central region
rifcsplowo2_01_scaffold_3500_29
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17522..18760
DNA (1239bp) protein (413aa)
dihydrolipoyllysine-residue acetyltransferase (EC:2.3.1.12); K00627 pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12] Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000380A0BF
dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex
rifcsplowo2_01_scaffold_3500_30
unknown

Not on your lists

comp(18717..19499)
DNA (783bp) protein (261aa)
Prolipoprotein diacylglyceryl transferase n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6I0P8_9BACT id=5103549 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Prolipoprotein diacylglyceryl transferase n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6I0P8_9BACT Tax=AR20
Prolipoprotein diacylglyceryl transferase
Displaying items 1-30 of 48 in total

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