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rifcsplowo2_01_scaffold_29899

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_29899_1
unknown

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152..943
DNA (792bp) protein (264aa)

This feature has no annotations

rifcsplowo2_01_scaffold_29899_2
unknown

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959..1363
DNA (405bp) protein (135aa)

This feature has no annotations

rifcsplowo2_01_scaffold_29899_3
R_OD1_Giovannonibacteria_43_16, Giovannonibacteria, Parcubacteria, Bacteria

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1365..2600
DNA (1236bp) protein (412aa)
putative diaminopimelate decarboxylase (EC:4.1.1.20)
Diaminopimelate decarboxylase n=2 Tax=Alcaligenes RepID=M5IUH6_9BURK
lysA; diaminopimelate decarboxylase Tax=RIFCSPHIGHO2_02_OD1_Giovannonibacteria_43_16_curated
rifcsplowo2_01_scaffold_29899_4
CG_Woesearch_02, Woesearchaeota, Archaea

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2641..3585
DNA (945bp) protein (315aa)
hypothetical protein
Putative uncharacterized protein Tax=CG_Woesearch_02
Putative uncharacterized protein id=5800109 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsplowo2_01_scaffold_29899_5

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3585..4685
DNA (1101bp) protein (367aa)
rad2; flap endonuclease-1; K04799 flap endonuclease-1 [EC:3.-.-.-] id=5046346 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Flap endonuclease 1 {ECO:0000256|HAMAP-Rule:MF_00614}; Short=FEN-1 {ECO:0000256|HAMAP-Rule:MF_00614};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00614};; Flap structure-specific endonuclease 1 {ECO:000025
flap endonuclease-1
rifcsplowo2_01_scaffold_29899_6

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4859..5329
DNA (471bp) protein (157aa)
Marine sediment metagenome DNA, contig: S01H1_S29914 {ECO:0000313|EMBL:GAG38880.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
Met-10+ protein id=5800111 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsplowo2_01_scaffold_29899_7

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comp(5417..5611)
DNA (195bp) protein (65aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO51271.1}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
rifcsplowo2_01_scaffold_29899_8

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comp(5647..6783)
DNA (1137bp) protein (379aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO53035.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
proteasome-activating nucleotidase; K03420 proteasome regulatory subunit id=5041798 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
proteasome-activating nucleotidase
rifcsplowo2_01_scaffold_29899_9
AR4, Woesearchaeaota, DPANN, Archaea

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comp(6829..7794)
DNA (966bp) protein (322aa)
leucyl aminopeptidase id=5043745 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
leucyl aminopeptidase Tax=AR4
leucyl aminopeptidase
rifcsplowo2_01_scaffold_29899_10
AR11, Woesearchaeaota, DPANN, Archaea

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comp(7775..9517)
DNA (1743bp) protein (581aa)
hypothetical protein Tax=AR11
leucyl aminopeptidase id=5041799 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
leucyl aminopeptidase
rifcsplowo2_01_scaffold_29899_11

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comp(9514..10548)
DNA (1035bp) protein (345aa)
Xaa-Pro aminopeptidase {ECO:0000313|EMBL:KHO53032.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
Xaa-Pro dipeptidase id=5800114 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
proline dipeptidase
rifcsplowo2_01_scaffold_29899_12
CG_Pacearch_05, Pacearchaeota, Archaea

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comp(10955..11863)
DNA (909bp) protein (303aa)
YARS; tyrosyl-tRNA synthetase; K01866 tyrosyl-tRNA synthetase [EC:6.1.1.1] Tax=CG_Pacearch_05
PREDICTED: tyrosine--tRNA ligase, cytoplasmic n=1 Tax=Echinops telfairi RepID=UPI000333D709
tyrosyl-tRNA synthetase
Displaying 12 items

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