ggKbase home page

rifcsplowo2_01_scaffold_16764

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_16764_1
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

1..150
DNA (150bp) protein (50aa)
UDP diphosphate synthase (EC:2.5.1.31)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacter
Isoprenyl transferase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C4K5_SPHTD
rifcsplowo2_01_scaffold_16764_2
Pyrococcus abyssi, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

147..1397
DNA (1251bp) protein (417aa)
RecJ-like single-stranded exonuclease recJ homolog n=2 Tax=Pyrococcus abyssi (strain GE5 / Orsay) RepID=Q9V2K8_PYRAB
recJ-like; ss-DNA-specific exonuclease recj related
RecJ-like single-stranded exonuclease recJ homolog {ECO:0000313|EMBL:CAB48990.1}; TaxID=272844 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyro
rifcsplowo2_01_scaffold_16764_3
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(1404..1670)
DNA (267bp) protein (89aa)
regulatory protein MarR id=5043998 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
regulatory protein MarR Tax=AR4
hypothetical protein
rifcsplowo2_01_scaffold_16764_4
unknown

Not on your lists

comp(1739..2521)
DNA (783bp) protein (261aa)

This feature has no annotations

rifcsplowo2_01_scaffold_16764_5

Not on your lists

2624..2938
DNA (315bp) protein (105aa)
hypothetical protein id=5046601 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Uncharacterized protein {ECO:0000313|EMBL:KHO45669.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
Uncharacterized protein family UPF0150
rifcsplowo2_01_scaffold_16764_6
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

2895..3161
DNA (267bp) protein (89aa)
Putative periplasmic or secreted lipoprotein n=1 Tax=Leptolyngbya sp. PCC 6406 RepID=L8LCL1_9CYAN
YcfA family protein; K07339 hypothetical protein Tax=RBG_13_Pacearchaeota_36_9_curated
hypothetical protein
rifcsplowo2_01_scaffold_16764_7
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

3234..5099
DNA (1866bp) protein (622aa)
hypothetical protein; K10844 DNA excision repair protein ERCC-2 [EC:3.6.4.12] Tax=RBG_13_Woesearchaeota_36_6_curated
DEAD_2 domain protein; K10844 DNA excision repair protein ERCC-2 [EC:3.6.4.12] id=5043688 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
ATP dependent helicase
rifcsplowo2_01_scaffold_16764_8
Dictyostelium discoideum, Dictyostelium, Dictyosteliida, Eukaryota

Not on your lists

comp(5103..5660)
DNA (558bp) protein (186aa)
Putative uncharacterized protein n=1 Tax=Dictyostelium discoideum RepID=Q54EU1_DICDI
Uncharacterized protein {ECO:0000313|EMBL:EAL61653.1}; TaxID=44689 species="Eukaryota; Amoebozoa; Mycetozoa; Dictyosteliida; Dictyostelium.;" source="Dictyostelium discoideum (Slime mold).;"
HAD family phosphatase
rifcsplowo2_01_scaffold_16764_9
unknown

Not on your lists

comp(5700..6629)
DNA (930bp) protein (310aa)

This feature has no annotations

rifcsplowo2_01_scaffold_16764_10
GWA2_OP11_40_7b, Woesebacteria, Microgenomates, Bacteria

Not on your lists

6891..7298
DNA (408bp) protein (136aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR73123.1}; TaxID=1618562 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWA2_40_7.;"
id=5799756 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsplowo2_01_scaffold_16764_11
unknown

Not on your lists

7320..7685
DNA (366bp) protein (122aa)

This feature has no annotations

rifcsplowo2_01_scaffold_16764_12
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

7733..8272
DNA (540bp) protein (180aa)
Uncharacterized protein MJ0778 n=1 Tax=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) RepID=Y778_METJA
hypothetical protein
metal dependent phosphohydrolase; K06950 uncharacterized protein Tax=CG_Woesearch_02
rifcsplowo2_01_scaffold_16764_13
unknown

Not on your lists

8245..8376
DNA (132bp) protein (44aa)

This feature has no annotations

rifcsplowo2_01_scaffold_16764_14
unknown

Not on your lists

comp(8414..9469)
DNA (1056bp) protein (352aa)

This feature has no annotations

rifcsplowo2_01_scaffold_16764_15
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

9543..10337
DNA (795bp) protein (265aa)
alaS; alanine--tRNA ligase/alanyl-tRNA synthetase (EC:6.1.1.7); K01872 alanyl-tRNA synthetase [EC:6.1.1.7] Tax=CG_Woesearch_03
alaS; alanyl-tRNA synthetase (EC:6.1.1.7); K01872 alanyl-tRNA synthetase [EC:6.1.1.7] id=5048640 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
alaS; alanine--tRNA ligase/alanyl-tRNA synthetase (EC:6.1.1.7)
rifcsplowo2_01_scaffold_16764_16
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

10294..11472
DNA (1179bp) protein (393aa)
alaS; alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase id=5799660 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Alanine--tRNA ligase Tax=AR15
Displaying 16 items

View Taxonomy