ggKbase home page

rifcsplowo2_01_scaffold_18344

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_18344_1
GWF2_Melainabacteria_37_15_curated, Melainabacteria, Bacteria

Not on your lists

1..654
DNA (654bp) protein (218aa)
Histidinol-phosphate aminotransferase id=3327399 bin=GWA1_Kazan_50_15 species=ACD17 genus=ACD17 taxon_order=ACD17 taxon_class=ACD17 phylum=Clamydiae tax=GWA1_Kazan_50_15 organism_group=Kazan organism_desc=Probably Kazan: candidate for curation
HAD superfamily hydrolase; K11777 HAD superfamily phosphatase Tax=GWF2_Melainabacteria_37_15_curated
HAD family hydrolase
rifcsplowo2_01_scaffold_18344_2
RBG_16_Zixibacteria_53_22_curated, Zixibacteria, Bacteria

Not on your lists

651..1244
DNA (594bp) protein (198aa)
imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19); K01693 imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] Tax=RBG_16_Zixibacteria_53_22_curated
imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19)
Imidazoleglycerol-phosphate dehydratase id=3327397 bin=GWA1_Kazan_50_15 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWA1_Kazan_50_15 organism_group=Kazan organism_desc=Probably Kazan: candidate for curation
rifcsplowo2_01_scaffold_18344_3
Acetobacter sp. CAG:977, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1241..1819
DNA (579bp) protein (193aa)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-
Imidazole glycerol phosphate synthase, glutamine amidotransferase subunit id=3327395 bin=GWA1_Kazan_50_15 species=[Ruminococcus] gnavus genus=Blautia taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA1_Kazan_50_15 organism_group=Kazan organism_desc=Probably Kazan: candidate for curation
imidazoleglycerol phosphate synthase, cyclase subunit
rifcsplowo2_01_scaffold_18344_4
Aneurinibacillus migulanus, Aneurinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1813..2568
DNA (756bp) protein (252aa)
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000256|HAMAP-Rule:MF_01013};; IGP synthase cyclase subunit {ECO:0000256|HAMAP-Rule:MF_01013}; IGP
hisF2; imidazole glycerol phosphate synthase, cyclase subunit HisF (EC:4.1.3.-)
HisF-LUCA n=1 Tax=synthetic construct RepID=UPI0003C0DDA4
rifcsplowo2_01_scaffold_18344_5
GWA2_Melainabacteria_34_9_curated, Melainabacteria, Bacteria

Not on your lists

2565..3788
DNA (1224bp) protein (408aa)
phosphoribosyl-ATP diphosphatase (EC:3.5.4.19 5.3.1.16)
Phosphoribosyl-ATP diphosphatase id=3327390 bin=GWA1_Kazan_50_15 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWA1_Kazan_50_15 organism_group=Kazan organism_desc=Probably Kazan: candidate for curation
phosphoribosyl-ATP diphosphatase Tax=GWA2_Melainabacteria_34_9_curated
rifcsplowo2_01_scaffold_18344_6
CG_CPR10_03, CG_CPR10, Bacteria

Not on your lists

3815..4981
DNA (1167bp) protein (389aa)
hisD; histidinol dehydrogenase HisD (EC:1.1.1.23) Tax=CG_CPR10_03
histidinol dehydrogenase (EC:1.1.1.23)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00036D1F14
rifcsplowo2_01_scaffold_18344_7
RIFOXYD12_FULL_Deltaproteobacteria_50_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5006..6388
DNA (1383bp) protein (461aa)
phosphomannomutase (EC:5.4.2.8); K01840 phosphomannomutase [EC:5.4.2.8] Tax=RIFOXYD12_FULL_Deltaproteobacteria_50_9_curated
phosphomannomutase (EC:5.4.2.8); K01840 phosphomannomutase [EC:5.4.2.8] id=5048690 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
phosphomannomutase (EC:5.4.2.8)
rifcsplowo2_01_scaffold_18344_8

Not on your lists

6462..7010
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W213_UNCMA id=5103857 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF63135.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_18344_9

Not on your lists

7007..7441
DNA (435bp) protein (145aa)
hypothetical protein
id=5103856 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein {ECO:0000313|EMBL:AJF63134.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_18344_10
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

7445..8236
DNA (792bp) protein (264aa)
RNA-binding protein snRNP-like protein id=5043944 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
RNA-binding protein snRNP-like protein Tax=AR4
putative RNA-binding protein, snRNP like protein
rifcsplowo2_01_scaffold_18344_11

Not on your lists

comp(8214..9020)
DNA (807bp) protein (269aa)
Marine sediment metagenome DNA, contig: S12H4_S07920 {ECO:0000313|EMBL:GAI97973.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
Sugar kinase, YjeF-related protein family id=5800079 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
carbohydrate kinase
rifcsplowo2_01_scaffold_18344_12

Not on your lists

comp(9017..9706)
DNA (690bp) protein (230aa)
Marine sediment metagenome DNA, contig: S01H1_S00061 {ECO:0000313|EMBL:GAF97319.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
Displaying 12 items

View Taxonomy