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rifcsplowo2_01_scaffold_5795

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_5795_1
CG_Woesearch_01, Woesearchaeota, Archaea

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245..1072
DNA (828bp) protein (276aa)
Type II secretion system protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DG92_9EURY id=5102968 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
type ii secretion system F domain-containing protein; K07333 archaeal flagellar protein FlaJ Tax=CG_Woesearch_01
Type II secretion system protein
rifcsplowo2_01_scaffold_5795_2
CG_Woesearch_01, Woesearchaeota, Archaea

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1069..2100
DNA (1032bp) protein (344aa)
Type II secretion system protein F GspF2 n=1 Tax=Candidatus Haloredivivus sp. G17 RepID=H0AA00_9EURY id=5102969 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein; K07333 archaeal flagellar protein FlaJ Tax=CG_Woesearch_01
Type II secretion system protein F GspF2
rifcsplowo2_01_scaffold_5795_3
unknown

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2432..2638
DNA (207bp) protein (69aa)

This feature has no annotations

rifcsplowo2_01_scaffold_5795_4
CG_Woesearch_02, Woesearchaeota, Archaea

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2638..3447
DNA (810bp) protein (270aa)
circadian clock protein, KaiC Tax=CG_Woesearch_02
circadian clock protein, KaiC id=5043640 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
RecA-superfamily ATPase possibly involved in signal transduction
rifcsplowo2_01_scaffold_5795_5

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3675..4028
DNA (354bp) protein (118aa)
single-stranded DNA-binding replication protein A, large (70 kD) subunit; K07466 replication factor A1 id=5048480 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Replication factor A1 {ECO:0000313|EMBL:KHO45514.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
replication factor A1
rifcsplowo2_01_scaffold_5795_6
unknown

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comp(4050..4793)
DNA (744bp) protein (248aa)

This feature has no annotations

rifcsplowo2_01_scaffold_5795_7
unknown

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comp(4951..5049)
DNA (99bp) protein (33aa)

This feature has no annotations

rifcsplowo2_01_scaffold_5795_8

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comp(5030..5251)
DNA (222bp) protein (74aa)
UPF0150 protein AF_1072 n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=Y1072_ARCFU id=5103599 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Marine sediment metagenome DNA, contig: S12H4_L00628 {ECO:0000313|EMBL:GAI78303.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
rifcsplowo2_01_scaffold_5795_9
R_OD1_Yanofskybacteria_43_32, Yanofskybacteria, Parcubacteria, Bacteria

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comp(5343..6233)
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Hippea maritima (strain ATCC 700847 / DSM 10411 / MH2) RepID=F2LXJ5_HIPMA
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_43_32_curated
hypothetical protein
rifcsplowo2_01_scaffold_5795_10

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comp(6269..8407)
DNA (2139bp) protein (713aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO52160.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
hypothetical protein id=5048098 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsplowo2_01_scaffold_5795_11
AR11, Woesearchaeaota, DPANN, Archaea

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comp(8621..10888)
DNA (2268bp) protein (756aa)
Putative uncharacterized protein Tax=AR11
hypothetical protein id=5048512 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsplowo2_01_scaffold_5795_12

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comp(10885..11022)
DNA (138bp) protein (46aa)
Marine sediment metagenome DNA, contig: S01H1_S33064 {ECO:0000313|EMBL:GAG30110.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
rifcsplowo2_01_scaffold_5795_13
unknown

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11345..11932
DNA (588bp) protein (196aa)

This feature has no annotations

rifcsplowo2_01_scaffold_5795_14
CG_Woesearch_01, Woesearchaeota, Archaea

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11985..12398
DNA (414bp) protein (138aa)
hypothetical protein
id=5048513 Tax=CG_Woesearch_01
Uncharacterized protein id=5799951 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsplowo2_01_scaffold_5795_15

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12531..13079
DNA (549bp) protein (183aa)
hypothetical protein
hypothetical protein id=5042245 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46743.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsplowo2_01_scaffold_5795_16
unknown

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comp(13234..13779)
DNA (546bp) protein (182aa)

This feature has no annotations

rifcsplowo2_01_scaffold_5795_17

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comp(13780..14382)
DNA (603bp) protein (201aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO51136.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
transmembrane_regions id=5042247 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsplowo2_01_scaffold_5795_18
AR11, Woesearchaeaota, DPANN, Archaea

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comp(14394..14987)
DNA (594bp) protein (198aa)
hypothetical protein
seg id=5043750 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR11
rifcsplowo2_01_scaffold_5795_19

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15143..15721
DNA (579bp) protein (193aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO50643.1}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
hypothetical protein id=5043746 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
translin
rifcsplowo2_01_scaffold_5795_20
Methanosaeta thermophila, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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15723..16904
DNA (1182bp) protein (394aa)
queuine tRNA-ribosyltransferase (EC:2.4.2.29)
Putative queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine tra
Putative queuine tRNA-ribosyltransferase n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B5F5_METTP rbh
rifcsplowo2_01_scaffold_5795_21

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comp(16943..17644)
DNA (702bp) protein (234aa)
Conserved hypothetical integral membrane protein n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BCR5_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KHO51312.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
rifcsplowo2_01_scaffold_5795_22

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17761..18051
DNA (291bp) protein (97aa)
hypothetical protein id=5047135 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Uncharacterized protein {ECO:0000313|EMBL:KHO45584.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
ssr1258; hypothetical protein
rifcsplowo2_01_scaffold_5795_23

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18048..18269
DNA (222bp) protein (74aa)
hypothetical protein; K07339 hypothetical protein id=5048663 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45326.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
rifcsplowo2_01_scaffold_5795_24
CG_Woesearch_02, Woesearchaeota, Archaea

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18320..19210
DNA (891bp) protein (297aa)
aspS; aspartyl-tRNA synthetase (EC:6.1.1.12); K01876 aspartyl-tRNA synthetase [EC:6.1.1.12] Tax=CG_Woesearch_02
aspS; aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartate--tRNA ligase id=5799880 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Displaying 24 items

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