ggKbase home page

rifcsplowo2_01_scaffold_80

Search features with annotation key words

Displaying items 1-30 of 113 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_80_1
unknown

Not on your lists

307..1104
DNA (798bp) protein (266aa)

This feature has no annotations

rifcsplowo2_01_scaffold_80_2
unknown

Not on your lists

comp(1135..1713)
DNA (579bp) protein (193aa)

This feature has no annotations

rifcsplowo2_01_scaffold_80_3
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(1747..6243)
DNA (4497bp) protein (1499aa)
seg id=5041845 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
seg Tax=AR4
rifcsplowo2_01_scaffold_80_4
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(6250..6756)
DNA (507bp) protein (169aa)
Transcriptional regulator, AsnC family n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C9Z7_SPHTD
AsnC family transcriptional regulator Tax=RBG_13_Pacearchaeota_36_9_curated
AsnC family transcriptional regulator
rifcsplowo2_01_scaffold_80_5

Not on your lists

comp(6948..7223)
DNA (276bp) protein (92aa)
hypothetical protein
Putative uncharacterized protein id=5800011 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF61342.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
rifcsplowo2_01_scaffold_80_6
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

7581..8348
DNA (768bp) protein (256aa)
TraB family protein n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VSP1_METIM id=5103107 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
trab determinant protein Tax=CG_Woesearch_02
TraB family protein
rifcsplowo2_01_scaffold_80_7
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

8405..9142
DNA (738bp) protein (246aa)
peptidase M50 Tax=CG_Woesearch_02
Peptidase M50 id=5041751 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
peptidase M50
rifcsplowo2_01_scaffold_80_8
unknown

Not on your lists

9215..9736
DNA (522bp) protein (174aa)

This feature has no annotations

rifcsplowo2_01_scaffold_80_9
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

9793..12018
DNA (2226bp) protein (742aa)
Hef nuclease; K10896 fanconi anemia group M protein Tax=CG_Woesearch_02
Hef nuclease id=5800171 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
DEAD/DEAH box helicase
rifcsplowo2_01_scaffold_80_10
unknown

Not on your lists

12390..12653
DNA (264bp) protein (88aa)

This feature has no annotations

rifcsplowo2_01_scaffold_80_11
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

12620..13018
DNA (399bp) protein (133aa)
hypothetical protein
id=5103450 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR20
rifcsplowo2_01_scaffold_80_12

Not on your lists

comp(13095..13949)
DNA (855bp) protein (285aa)
Protease HtpX homolog {ECO:0000256|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_00188};; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
Protease HtpX homolog id=5799559 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
peptidase M48 Ste24p
rifcsplowo2_01_scaffold_80_13
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

14274..14807
DNA (534bp) protein (178aa)
Methyltransferase domain protein n=1 Tax=Leptospira sp. B5-022 RepID=M6D5C5_9LEPT
hypothetical protein; K07027 Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
type 11 methyltransferase
rifcsplowo2_01_scaffold_80_14

Not on your lists

14936..16249
DNA (1314bp) protein (438aa)
UDPglucose 6-dehydrogenase {ECO:0000313|EMBL:KHO50271.1}; EC=1.1.1.22 {ECO:0000313|EMBL:KHO50271.1};; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
UDP-glucose 6-dehydrogenase (EC:1.1.1.22)
Similar to UDP-glucose 6-dehydrogenase id=5004314 bin=GWA2_Planctomycete_KSU_39_15 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycete_KSU_39_15 organism_group=Planctomycetes
rifcsplowo2_01_scaffold_80_15
RIFOXYA2_FULL_Elusimicrobia_47_53_curated, Elusimicrobia, Bacteria

Not on your lists

16267..17202
DNA (936bp) protein (312aa)
dTDP-glucose 4,6-dehydratase; K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] Tax=RIFOXYA2_FULL_Elusimicrobia_47_53_curated
NAD-dependent epimerase/dehydratase id=1714681 bin=GWB2_Ignavibacteria_35_12 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
NAD-dependent epimerase/dehydratase
rifcsplowo2_01_scaffold_80_16
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(17254..18678)
DNA (1425bp) protein (475aa)
Polysaccharide biosynthesis protein n=1 Tax=Methanobacterium formicicum DSM 3637 RepID=K2R9B7_METFO
Polysaccharide biosynthesis protein Tax=GWA2_OD1_40_9
polysaccharide biosynthesis protein
rifcsplowo2_01_scaffold_80_17
GWF2_Gammaproteobacteria_41_13_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18749..20143
DNA (1395bp) protein (465aa)
hypothetical protein n=1 Tax=Methyloversatilis universalis RepID=UPI000370C59C
hypothetical protein Tax=GWF2_Gammaproteobacteria_41_13_curated
hypothetical protein
rifcsplowo2_01_scaffold_80_18
R_RIF_OD1_11_51_15, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

20310..23312
DNA (3003bp) protein (1001aa)
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_11_51_15_curated
Putative uncharacterized protein id=3633783 bin=GWF2_Bacteroidetes_29_10 species=Fusobacterium varium genus=Fusobacterium taxon_order=Fusobacteriales taxon_class=Fusobacteriia phylum=Fusobacteria tax=GWF2_Bacteroidetes_29_10 organism_group=Bacteroidetes
hypothetical protein
rifcsplowo2_01_scaffold_80_19
R_RIF_OD1_11_51_15, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

23314..24012
DNA (699bp) protein (233aa)
peptidase C26; K07010 putative glutamine amidotransferase Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_11_51_15_curated
Predicted glutamine amidotransferase id=3633780 bin=GWF2_Bacteroidetes_29_10 species=Haloferax elongans genus=Haloferax taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWF2_Bacteroidetes_29_10 organism_group=Bacteroidetes
peptidase C26
rifcsplowo2_01_scaffold_80_20
unknown

Not on your lists

comp(24060..24995)
DNA (936bp) protein (312aa)

This feature has no annotations

rifcsplowo2_01_scaffold_80_21

Not on your lists

25160..25951
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JIJ7_FUSVA
Marine sediment metagenome DNA, contig: S01H1_L09350 {ECO:0000313|EMBL:GAF99397.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
hypothetical protein
rifcsplowo2_01_scaffold_80_22
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(25989..26864)
DNA (876bp) protein (292aa)
hypothetical protein n=1 Tax=Omnitrophica bacterium SCGC AAA257-O07 RepID=UPI0003B31E18
CDP-alcohol phosphatidyltransferase family {ECO:0000313|EMBL:KKR79114.1}; TaxID=1618734 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_40_9.;"
hypothetical protein
rifcsplowo2_01_scaffold_80_23
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(26912..28042)
DNA (1131bp) protein (377aa)
Glycosyltransferase n=1 Tax=Thiorhodovibrio sp. 970 RepID=H8Z0J3_9GAMM
Predicted glycosyl transferase, group 1 Tax=GWA2_OD1_40_9
group 1 glycosyl transferase
rifcsplowo2_01_scaffold_80_24
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(28052..29026)
DNA (975bp) protein (325aa)
yfnG; sporulation putative NAD-dependent epimerase/dehydratase YfnG; K01709 CDP-glucose 4,6-dehydratase [EC:4.2.1.45] id=5241083 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
dTDP-glucose 4,6-dehydratase Tax=GWA2_OD1_40_9
hypothetical protein
rifcsplowo2_01_scaffold_80_25
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(29023..29718)
DNA (696bp) protein (232aa)
glucose-1-phosphate cytidylyltransferase (EC:2.7.7.33)
Glucose-1-phosphate cytidylyltransferase Tax=GWA2_OD1_40_9
Glucose-1-phosphate cytidylyltransferase id=1794165 bin=GWB2_Clostridiales_37_7 species=Clostridium butyricum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good +
rifcsplowo2_01_scaffold_80_26

Not on your lists

29885..31180
DNA (1296bp) protein (432aa)
Putative glycosyltransferase n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YWZ3_METPS
Glycosyl transferase group 1 {ECO:0000313|EMBL:KHO53838.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
putative glycosyltransferase
rifcsplowo2_01_scaffold_80_27

Not on your lists

31193..31900
DNA (708bp) protein (236aa)
Methyltransferase type 11 n=3 Tax=Amycolatopsis mediterranei RepID=D8HP29_AMYMU
Marine sediment metagenome DNA, contig: S03H2_S19080 {ECO:0000313|EMBL:GAH81455.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
methyltransferase type 11
rifcsplowo2_01_scaffold_80_28
R_OP11_Roizmanbacteria_38_11, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

comp(31954..32703)
DNA (750bp) protein (250aa)
methyltransferase Tax=RIFCSPHIGHO2_02_FULL_OP11_Roizmanbacteria_38_11_curated
Methyltransferase, putative id=3923360 bin=GWF2_Planctomycetes_42_9 species=Methanosaeta concilii genus=Methanosaeta taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWF2_Planctomycetes_42_9 organism_group=Planctomycetes
methyltransferase
rifcsplowo2_01_scaffold_80_29
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(32700..33587)
DNA (888bp) protein (296aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036EF829
Glycosyl transferase family 2 Tax=GWA2_OD1_40_9
Glycosyltransferases involved in cell wall biogenesis
rifcsplowo2_01_scaffold_80_30
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(33925..34341)
DNA (417bp) protein (139aa)
PadR-like protein family transcriptional regulator
PadR-like family transcriptional regulator id=5240645 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
PadR-like family transcriptional regulator Tax=AR10
Displaying items 1-30 of 113 in total

View Taxonomy