ggKbase home page

rifcsplowo2_01_scaffold_285

Search features with annotation key words

Displaying items 1-30 of 156 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_285_1

Not on your lists

3..191
DNA (189bp) protein (63aa)
id=5043699 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46675.1}; Flags: Fragment;; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsplowo2_01_scaffold_285_2

Not on your lists

505..1152
DNA (648bp) protein (216aa)
hypothetical protein id=5043698 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b rbh
Uncharacterized protein {ECO:0000313|EMBL:KHO46674.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
rifcsplowo2_01_scaffold_285_3

Not on your lists

1193..1699
DNA (507bp) protein (169aa)
hypothetical protein; K09005 hypothetical protein id=5043697 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b rbh
Uncharacterized protein {ECO:0000313|EMBL:KHO46673.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
rifcsplowo2_01_scaffold_285_4

Not on your lists

1805..2419
DNA (615bp) protein (205aa)
id=5043696 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b rbh
Uncharacterized protein {ECO:0000313|EMBL:KHO46672.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsplowo2_01_scaffold_285_5

Not on your lists

2479..3000
DNA (522bp) protein (174aa)
isopentenyl-diphosphate delta-isomerase; K01823 isopentenyl-diphosphate delta-isomerase [EC:5.3.3.2] id=5043695 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b rbh
Isopentenyl-diphosphate delta-isomerase {ECO:0000313|EMBL:KHO46671.1}; EC=5.3.3.2 {ECO:0000313|EMBL:KHO46671.1};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
isopentenyl-diphosphate delta-isomerase (EC:5.3.3.2)
rifcsplowo2_01_scaffold_285_6

Not on your lists

3175..4461
DNA (1287bp) protein (429aa)
elongation factor 1-alpha (EC:2.7.7.4); K03231 elongation factor 1-alpha id=5043694 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b rbh
Elongation factor 1-alpha {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004060}; Short=EF-1-alpha {ECO:0000256|HAMAP-Rule:MF_00118};; Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118};
Elongation factor 1-alpha
rifcsplowo2_01_scaffold_285_7

Not on your lists


4547..4858
DNA (312bp) protein (104aa)
rps10p; 30S ribosomal protein S10P; K02946 small subunit ribosomal protein S10 id=5043693 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508, ECO:0000256|SAAS:SAAS00243320}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rps10p; 30S ribosomal protein S10P
rifcsplowo2_01_scaffold_285_8

Not on your lists

4929..5408
DNA (480bp) protein (160aa)
id=5043692 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b rbh
Uncharacterized protein {ECO:0000313|EMBL:KHO46668.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsplowo2_01_scaffold_285_9

Not on your lists

5539..6840
DNA (1302bp) protein (434aa)
fabH; 3-oxoacyl-ACP synthase (EC:2.3.1.41); K00648 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] id=5043691 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b rbh
3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000313|EMBL:KHO46667.1}; EC=2.3.1.180 {ECO:0000313|EMBL:KHO46667.1};; EC=2.3.1.41 {ECO:0000313|EMBL:KHO46667.1};; TaxID=1579365 species="Archaea.;"
fabH; 3-oxoacyl-[acyl-carrier-] synthase III family protein (EC:2.3.1.180)
rifcsplowo2_01_scaffold_285_10

Not on your lists

comp(6880..7101)
DNA (222bp) protein (74aa)
Transcription regulator Rrf2-like id=5043690 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46666.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
rifcsplowo2_01_scaffold_285_11

Not on your lists

7306..8031
DNA (726bp) protein (242aa)
hydrolase id=5043689 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b rbh
Hydrolase {ECO:0000313|EMBL:KHO46665.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hydrolase
rifcsplowo2_01_scaffold_285_12

Not on your lists

8028..9914
DNA (1887bp) protein (629aa)
DEAD_2 domain protein; K10844 DNA excision repair protein ERCC-2 [EC:3.6.4.12] id=5043688 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b rbh
DNA excision repair protein ERCC-2 {ECO:0000313|EMBL:KHO46664.1}; EC=3.6.4.12 {ECO:0000313|EMBL:KHO46664.1};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
ATP dependent helicase
rifcsplowo2_01_scaffold_285_13

Not on your lists

9941..10138
DNA (198bp) protein (66aa)
seg id=5043687 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46663.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsplowo2_01_scaffold_285_14

Not on your lists

10135..10290
DNA (156bp) protein (52aa)
id=5043686 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46662.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsplowo2_01_scaffold_285_15

Not on your lists

10471..10671
DNA (201bp) protein (67aa)
Protein of unknown function DUF2283 id=5043685 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46661.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsplowo2_01_scaffold_285_16

Not on your lists

10725..11084
DNA (360bp) protein (120aa)
seg id=5043684 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46660.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsplowo2_01_scaffold_285_17

Not on your lists

comp(11081..12466)
DNA (1386bp) protein (462aa)
multidrug transporter
Drug resistance transporter, Bcr/CflA subfamily id=5043683 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b rbh
Drug resistance transporter, Bcr/CflA subfamily {ECO:0000313|EMBL:KHO46659.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsplowo2_01_scaffold_285_18

Not on your lists

comp(12524..13039)
DNA (516bp) protein (172aa)
hypothetical protein id=5043682 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b rbh
Uncharacterized protein {ECO:0000313|EMBL:KHO46658.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
rifcsplowo2_01_scaffold_285_19

Not on your lists

comp(13042..15312)
DNA (2271bp) protein (757aa)
hypothetical protein id=5043681 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b rbh
Uncharacterized protein {ECO:0000313|EMBL:KHO46657.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
rifcsplowo2_01_scaffold_285_20

Not on your lists

comp(15359..16411)
DNA (1053bp) protein (351aa)
cax; calcium/proton exchanger; K07300 Ca2+:H+ antiporter id=5043680 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b rbh
Calcium/proton exchanger, Ca2+:H+ antiporter {ECO:0000313|EMBL:KHO46656.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
cax; calcium/proton antiporter
rifcsplowo2_01_scaffold_285_21

Not on your lists

comp(16875..17690)
DNA (816bp) protein (272aa)
site-specific recombinase XerD id=5043679 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b rbh
Site-specific recombinase XerD {ECO:0000313|EMBL:KHO46655.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
rifcsplowo2_01_scaffold_285_22

Not on your lists

comp(17687..17866)
DNA (180bp) protein (60aa)
id=5043678 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46654.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsplowo2_01_scaffold_285_23

Not on your lists

17948..18313
DNA (366bp) protein (122aa)
hypothetical protein id=5043677 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46653.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
domain of unknown function family protein
rifcsplowo2_01_scaffold_285_24

Not on your lists

comp(18451..18933)
DNA (483bp) protein (161aa)
hypothetical protein
HEPN id=5043676 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b rbh
Uncharacterized protein {ECO:0000313|EMBL:KHO46652.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsplowo2_01_scaffold_285_25

Not on your lists

comp(18921..19529)
DNA (609bp) protein (203aa)
id=5043675 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b rbh
Uncharacterized protein {ECO:0000313|EMBL:KHO46651.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsplowo2_01_scaffold_285_26

Not on your lists

19679..20617
DNA (939bp) protein (313aa)
huntingtin interacting protein E-like protein id=5043674 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b rbh
Huntingtin interacting protein E-like protein {ECO:0000313|EMBL:KHO46650.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
rifcsplowo2_01_scaffold_285_27

Not on your lists

21015..21290
DNA (276bp) protein (92aa)
hypothetical protein id=5043673 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46649.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
rifcsplowo2_01_scaffold_285_28

Not on your lists

comp(21580..21987)
DNA (408bp) protein (136aa)
id=5043672 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46648.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsplowo2_01_scaffold_285_29

Not on your lists

comp(21968..22342)
DNA (375bp) protein (125aa)
id=5043671 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46647.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsplowo2_01_scaffold_285_30

Not on your lists

22462..23442
DNA (981bp) protein (327aa)
leucine-responsive regulatory protein 1; K03719 Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein id=5043670 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b rbh
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein {ECO:0000313|EMBL:KHO46646.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
Transcriptional regulator
Displaying items 1-30 of 156 in total

View Taxonomy