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rifcsplowo2_01_scaffold_12096

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_12096_1
CG_Woesearch_02, Woesearchaeota, Archaea

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107..364
DNA (258bp) protein (86aa)
Tax=CG_Woesearch_02
rifcsplowo2_01_scaffold_12096_2
CG_Woesearch_02, Woesearchaeota, Archaea

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370..699
DNA (330bp) protein (110aa)
id=4744551 Tax=CG_Woesearch_02
id=4744551 bin=GWC2_OP3_44_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
rifcsplowo2_01_scaffold_12096_3
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

comp(907..2529)
DNA (1623bp) protein (541aa)
bifunctional folylpolyglutamate synthase/dihydrofolate synthase; K11754 dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] Tax=GWC2_Nitrospirae_56_14_curated
FolC bifunctional protein id=4656112 bin=GWC2_Nitrospirae-rel_56_14 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
FolC bifunctional protein
rifcsplowo2_01_scaffold_12096_4

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comp(2748..3587)
DNA (840bp) protein (280aa)
id=5042256 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46754.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsplowo2_01_scaffold_12096_5
unknown

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3941..4486
DNA (546bp) protein (182aa)

This feature has no annotations

rifcsplowo2_01_scaffold_12096_6

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4622..5377
DNA (756bp) protein (252aa)
transmembrane_regions id=5042257 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46755.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsplowo2_01_scaffold_12096_7
unknown

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5498..5944
DNA (447bp) protein (149aa)

This feature has no annotations

rifcsplowo2_01_scaffold_12096_8
AR15, Woesearchaeaota, DPANN, Archaea

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comp(6007..6243)
DNA (237bp) protein (79aa)
Putative uncharacterized protein id=5799866 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Putative uncharacterized protein Tax=AR15
hypothetical protein
rifcsplowo2_01_scaffold_12096_9
unknown

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6513..7484
DNA (972bp) protein (324aa)

This feature has no annotations

rifcsplowo2_01_scaffold_12096_10

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7699..9036
DNA (1338bp) protein (446aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU53601.1}; Flags: Fragment;; TaxID=1618714 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWE2_47_10.;"
rifcsplowo2_01_scaffold_12096_11
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

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comp(9336..10373)
DNA (1038bp) protein (346aa)
phosphoribosylformylglycinamidine cyclo-ligase; K01933 phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] Tax=RIFOXYC12_FULL_TA06_54_24_curated
Phosphoribosylaminoimidazole synthetase n=1 Tax=mine drainage metagenome RepID=E6PYM9_9ZZZZ rbh
phosphoribosylformylglycinamidine cyclo-ligase
rifcsplowo2_01_scaffold_12096_12
RIFOXYB2_FULL_WOR_2_38_16_curated, WOR-2, Bacteria

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comp(10895..11719)
DNA (825bp) protein (275aa)
Peptidase, S54 family id=3283925 bin=GWF2_OP3_38_59 species=unknown genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
hypothetical protein Tax=RIFOXYB2_FULL_WOR_2_38_16_curated
glpG; intramembrane serine protease
rifcsplowo2_01_scaffold_12096_13
GWC2_Verrucomicrobia_42_7_curated, Opitutae, Verrucomicrobia, Bacteria

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comp(11803..12750)
DNA (948bp) protein (316aa)
SpoVT/AbrB domain protein n=12 Tax=Sulfolobus RepID=C3MR72_SULIL id=5103746 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
phosphate uptake regulator PhoU Tax=GWC2_Verrucomicrobia_42_7_curated
SpoVT/AbrB protein
rifcsplowo2_01_scaffold_12096_14
unknown

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12940..13089
DNA (150bp) protein (50aa)

This feature has no annotations

rifcsplowo2_01_scaffold_12096_15
Thermosediminibacter oceani, Thermosediminibacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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13389..15383
DNA (1995bp) protein (665aa)
DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=555079 species="Bacteria; Fi
DNA gyrase subunit B n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9RYX6_THEOJ
rifcsplowo2_01_scaffold_12096_16
unknown

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15770..16525
DNA (756bp) protein (252aa)

This feature has no annotations

rifcsplowo2_01_scaffold_12096_17
unknown

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16697..17449
DNA (753bp) protein (251aa)

This feature has no annotations

rifcsplowo2_01_scaffold_12096_18
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(17446..18057)
DNA (612bp) protein (204aa)
peptidase S54, rhomboid family protein; K07059 Tax=RBG_13_Pacearchaeota_36_9_curated
Peptidase S54, rhomboid family protein id=4688817 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
peptidase S54, rhomboid family protein
rifcsplowo2_01_scaffold_12096_19
unknown

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comp(18145..18591)
DNA (447bp) protein (149aa)

This feature has no annotations

rifcsplowo2_01_scaffold_12096_20
unknown

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comp(18807..19340)
DNA (534bp) protein (178aa)

This feature has no annotations

rifcsplowo2_01_scaffold_12096_21
AR10, Diapherotrites, DPANN, Archaea

Not on your lists


comp(19427..20929)
DNA (1503bp) protein (501aa)
prolyl-tRNA synthetase (EC:6.1.1.15)
prolyl-tRNA synthetase (EC:6.1.1.15); K01881 prolyl-tRNA synthetase [EC:6.1.1.15] id=5240603 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
prolyl-tRNA synthetase (EC:6.1.1.15); K01881 prolyl-tRNA synthetase [EC:6.1.1.15] Tax=AR10
rifcsplowo2_01_scaffold_12096_22
unknown

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comp(21037..22011)
DNA (975bp) protein (325aa)

This feature has no annotations

rifcsplowo2_01_scaffold_12096_23
unknown

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comp(22111..22314)
DNA (204bp) protein (68aa)

This feature has no annotations

rifcsplowo2_01_scaffold_12096_24
unknown

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comp(22311..22475)
DNA (165bp) protein (55aa)

This feature has no annotations

rifcsplowo2_01_scaffold_12096_25
BJP_IG2069_Spirochaetales_48_31, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(22914..25076)
DNA (2163bp) protein (721aa)
Amino acid permease-associated region n=1 Tax=Ilyobacter polytropus (strain DSM 2926 / CuHBu1) RepID=E3HB46_ILYPC rbh
amino acid permease-associated protein
Tax=BJP_IG2069_Spirochaetales_48_31
rifcsplowo2_01_scaffold_12096_26
GWA1_OD1_40_21, Parcubacteria, Bacteria

Not on your lists

comp(25185..26177)
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2D0H0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKR54172.1}; TaxID=1618784 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_40_21.;"
transketolase
rifcsplowo2_01_scaffold_12096_27
R_OP11_Levybacteria_36_8b, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(26187..27083)
DNA (897bp) protein (299aa)
tktB; transketolase N-terminal domain protein (EC:2.2.1.1) Tax=RIFCSPLOWO2_02_FULL_OP11_Levybacteria_36_8b_curated
Transketolase domain protein id=3423632 bin=GWA1_ZB2_49_26 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
hypothetical protein
rifcsplowo2_01_scaffold_12096_28
unknown

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27214..27948
DNA (735bp) protein (245aa)

This feature has no annotations

rifcsplowo2_01_scaffold_12096_29
unknown

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28157..28408
DNA (252bp) protein (84aa)

This feature has no annotations

rifcsplowo2_01_scaffold_12096_30
unknown

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28405..29700
DNA (1296bp) protein (432aa)

This feature has no annotations

Displaying items 1-30 of 35 in total

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