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rifcsplowo2_01_scaffold_42717

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_42717_1
unknown

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3..80
-----------------
DNA (78bp)
protein (26aa)

This feature has no annotations

rifcsplowo2_01_scaffold_42717_2
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(138..368)
-----------------
DNA (231bp)
protein (77aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036834B8
Putative periplasmic or secreted lipoprotein {ECO:0000313|EMBL:KCZ71327.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatu
YcfA family protein
rifcsplowo2_01_scaffold_42717_3
Methanoculleus marisnigri, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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comp(355..567)
-----------------
DNA (213bp)
protein (71aa)
Putative uncharacterized protein n=1 Tax=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) RepID=A3CUI0_METMJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABN57030.1}; TaxID=368407 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanoculleus.;" source="Methanoculleus
rifcsplowo2_01_scaffold_42717_4

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comp(600..1826)
-----------------
DNA (1227bp)
protein (409aa)
tRNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
tRNA-splicing ligase RtcB n=1 Tax=Chlorogloeopsis RepID=UPI0002DC627D
protein of unknown function UPF0027
rifcsplowo2_01_scaffold_42717_5
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1869..2114)
-----------------
DNA (246bp)
protein (82aa)
RNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=35554 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacter
Putative uncharacterized protein id=4845855 bin=PER_GWC2_41_7 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
hypothetical protein
rifcsplowo2_01_scaffold_42717_6
GWA2_WOR_2_47_8_curated, WOR-2, Bacteria

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comp(2107..2928)
-----------------
DNA (822bp)
protein (274aa)
Tax=GWA2_WOR_2_47_8_curated
rifcsplowo2_01_scaffold_42717_7
unknown

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3129..3926
-----------------
DNA (798bp)
protein (266aa)

This feature has no annotations

rifcsplowo2_01_scaffold_42717_8
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3937..5301)
-----------------
DNA (1365bp)
protein (455aa)
RNA polymerase sigma factor n=1 Tax=Bilophila sp. 4_1_30 RepID=G1V3F9_9DELT
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophil
RNA polymerase sigma 70 family subunit
rifcsplowo2_01_scaffold_42717_9
unknown

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5437..5649
-----------------
DNA (213bp)
protein (71aa)

This feature has no annotations

Displaying 9 items

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