ggKbase home page

rifcsplowo2_01_scaffold_20586

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
rifcsplowo2_01_scaffold_20586_1
unknown

Not on your lists

3..80
-----------------
DNA (78bp)
protein (26aa)

This feature has no annotations

rifcsplowo2_01_scaffold_20586_2
unknown

Not on your lists

comp(202..1119)
-----------------
DNA (918bp)
protein (306aa)

This feature has no annotations

rifcsplowo2_01_scaffold_20586_3
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(1067..2698)
-----------------
DNA (1632bp)
protein (544aa)
hypothetical protein
id=5103894 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rifcsplowo2_01_scaffold_20586_4
unknown

Not on your lists

comp(2698..3621)
-----------------
DNA (924bp)
protein (308aa)

This feature has no annotations

rifcsplowo2_01_scaffold_20586_5
unknown

Not on your lists

comp(3621..4982)
-----------------
DNA (1362bp)
protein (454aa)
ATPase associated with various cellular activities AAA_5 n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KRC3_ARCVS id=5102882 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
ATPase associated with various cellular activity AAA_5
rifcsplowo2_01_scaffold_20586_6
AR13, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(4984..5130)
-----------------
DNA (147bp)
protein (49aa)
CopG-like DNA-binding id=5800286 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsplowo2_01_scaffold_20586_7

Not on your lists

5552..6706
-----------------
DNA (1155bp)
protein (385aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037BDA7E
RNA-directed DNA polymerase Reverse transcriptase
rifcsplowo2_01_scaffold_20586_8
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(6745..7689)
-----------------
DNA (945bp)
protein (315aa)
Putative uncharacterized protein id=1854696 bin=GWE2_Clostridiales_32_10 species=Methanosarcina acetivorans genus=Methanosarcina taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWE2_Clostridiales_32_10 organism_group=Clostridiales
hypothetical protein
rifcsplowo2_01_scaffold_20586_9
Thermoplasmatales archaeon SCGC AB-540-F20, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

7753..8382
-----------------
DNA (630bp)
protein (210aa)
Winged helix-turn helix n=1 Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7T7W2_9EURY
hypothetical protein
rifcsplowo2_01_scaffold_20586_10
Dermacoccus sp. Ellin185, Dermacoccus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8541..8903
-----------------
DNA (363bp)
protein (121aa)
hypothetical protein n=1 Tax=Streptomyces canus RepID=UPI000372C534
transposase
rifcsplowo2_01_scaffold_20586_11
unknown

Not on your lists

9133..9324
-----------------
DNA (192bp)
protein (64aa)

This feature has no annotations

rifcsplowo2_01_scaffold_20586_12
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists


9683..10882
-----------------
DNA (1200bp)
protein (400aa)
BSCG--tRNA--synthetase--Histidyl
Histidine--tRNA ligase n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SVR1_9BACT id=5103662 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Histidine-tRNA ligase
rifcsplowo2_01_scaffold_20586_13
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

comp(10885..11856)
-----------------
DNA (972bp)
protein (324aa)
Chromosome segregation and condensation protein ScpA n=1 Tax=Candidatus Parvarchaeum acidophilus ARMAN-5 RepID=D6GVZ3_9EURY id=5103660 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Chromosome segregation and condensation protein ScpA
rifcsplowo2_01_scaffold_20586_14
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(11884..12516)
-----------------
DNA (633bp)
protein (211aa)
rifcsplowo2_01_scaffold_20586_15
unknown

Not on your lists

comp(12862..13353)
-----------------
DNA (492bp)
protein (164aa)

This feature has no annotations

rifcsplowo2_01_scaffold_20586_16
GWC2_OD1_ACD81_39_22, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

comp(13693..14100)
-----------------
DNA (408bp)
protein (136aa)
seg 8..18 id=133321 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
rifcsplowo2_01_scaffold_20586_17

Not on your lists

comp(14338..14538)
-----------------
DNA (201bp)
protein (67aa)
30S ribosomal protein S27ae n=1 Tax=Thermococcus sp. (strain CGMCC 1.5172 / 4557) RepID=G0HJA0_THES4
30S ribosomal protein S27ae
rifcsplowo2_01_scaffold_20586_18
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(14531..14803)
-----------------
DNA (273bp)
protein (91aa)
rifcsplowo2_01_scaffold_20586_19
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(14800..14988)
-----------------
DNA (189bp)
protein (63aa)
DNA-directed RNA polymerase, RpoE2, archaeal n=1 Tax=sediment metagenome RepID=D9PM38_9ZZZZ
spt; Transcription elongation factor Spt4
rifcsplowo2_01_scaffold_20586_20
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists


comp(14990..15595)
-----------------
DNA (606bp)
protein (202aa)
ASCG--DNA-directed--RNA--polymerase
DNA-directed RNA polymerase subunit E n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6VV26_9EURY
DNA-directed RNA polymerase subunit E
rifcsplowo2_01_scaffold_20586_21
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(15715..16089)
-----------------
DNA (375bp)
protein (125aa)
rifcsplowo2_01_scaffold_20586_22
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

16164..16724
-----------------
DNA (561bp)
protein (187aa)
seg id=5042267 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsplowo2_01_scaffold_20586_23
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

16721..17380
-----------------
DNA (660bp)
protein (220aa)
Displaying 23 items

View Taxonomy