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rifcsplowo2_01_scaffold_30192

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_30192_1
unknown

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144..632
-----------------
DNA (489bp)
protein (163aa)

This feature has no annotations

rifcsplowo2_01_scaffold_30192_2

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comp(610..906)
-----------------
DNA (297bp)
protein (99aa)
Ribonuclease P protein component 4 {ECO:0000256|HAMAP-Rule:MF_00757}; Short=RNase P component 4 {ECO:0000256|HAMAP-Rule:MF_00757};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00757};; Rpp21 {ECO:0000256|H
Ribonuclease P protein component 4 n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HGC9_METFS id=5103674 bin=GW2011_AR20_complete species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Ribonuclease P protein component 4
rifcsplowo2_01_scaffold_30192_3
Methanococcus voltae, Methanococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

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1062..1913
-----------------
DNA (852bp)
protein (284aa)
Magnesium and cobalt transport protein CorA n=1 Tax=Methanococcus voltae (strain ATCC BAA-1334 / A3) RepID=D7DTW4_METV3
magnesium and cobalt transport protein CorA
Magnesium transport protein CorA {ECO:0000256|RuleBase:RU362010}; TaxID=456320 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanococcaceae; Methanococcus.;" source="Methanococcus
rifcsplowo2_01_scaffold_30192_4

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1904..2557
-----------------
DNA (654bp)
protein (218aa)
hypothetical protein
id=5103790 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein {ECO:0000313|EMBL:AJF63068.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_30192_5

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2559..2957
-----------------
DNA (399bp)
protein (133aa)
hypothetical protein
id=5103789 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein {ECO:0000313|EMBL:AJF63067.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_30192_6

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comp(2944..4155)
-----------------
DNA (1212bp)
protein (404aa)
ASCG--CCA-adding--enzyme
CCA-adding enzyme {ECO:0000256|HAMAP-Rule:MF_01264}; EC=2.7.7.72 {ECO:0000256|HAMAP-Rule:MF_01264};; CCA tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01264}; tRNA CCA-pyrophosphorylase {ECO:
tRNA nucleotidyltransferase (CCA-adding enzyme) n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6WSV3_9EURY id=5103551 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
tRNA nucleotidyltransferase CCA-adding enzyme
rifcsplowo2_01_scaffold_30192_7
unknown

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comp(4200..4628)
-----------------
DNA (429bp)
protein (143aa)

This feature has no annotations

rifcsplowo2_01_scaffold_30192_8
unknown

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comp(4667..5428)
-----------------
DNA (762bp)
protein (254aa)
Ribosomal RNA-processing protein RRP42 n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BIN3_9EURY id=5103846 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Ribosomal RNA-processing protein RRP42 n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BIN3_9EURY Tax=AR20
Ribosomal RNA-processing protein RRP42
rifcsplowo2_01_scaffold_30192_9

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comp(5421..6128)
-----------------
DNA (708bp)
protein (236aa)
exosome complex exonuclease Rrp41 n=1 Tax=Thermococcus zilligii AN1 RepID=UPI000299EC77 id=5103845 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
exosome complex exonuclease Rrp41
Exosome complex exonuclease Rrp41 {ECO:0000313|EMBL:AJF63123.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_30192_10
unknown

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comp(6125..6805)
-----------------
DNA (681bp)
protein (227aa)
Probable exosome complex RNA-binding protein 1 n=1 Tax=Pyrococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) RepID=ECR1_PYRKO id=5103844 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Probable exosome complex RNA-binding protein 1 n=1 Tax=Pyrococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) RepID=ECR1_PYRKO Tax=AR20
putative exosome complex RNA-binding protein 1
rifcsplowo2_01_scaffold_30192_11
unknown

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comp(6959..7075)
-----------------
DNA (117bp)
protein (39aa)

This feature has no annotations

Displaying 11 items

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