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rifcsplowo2_01_scaffold_21554

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_21554_1
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

103..1266
-----------------
DNA (1164bp)
protein (388aa)
purM; phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1); K01933 phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] id=5098432 bin=PER_GWF2_43_18 species=PER_GWF2_42_17 genus=PER_GWF2_42_17 taxon_order=PER_GWF2_42_17 taxon_class=PER_GWF2_42_17 phylum=PER tax=PER_GWF2_43_18 organism_group=PER (Peregrinibacteria)
purM; phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1); K01933 phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] Tax=PER_GWF2_43_17
Phosphoribosylformylglycinamidine cyclo-ligase
rifcsplowo2_01_scaffold_21554_2
R_RIF_OD1_06_38_12b, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

1291..1887
-----------------
DNA (597bp)
protein (199aa)
Putative membrane protein (DUF2238) n=1 Tax=Methylophaga frappieri (strain ATCC BAA-2434 / DSM 25690 / JAM7) RepID=I1YJY4_METFJ
hypothetical protein; K08984 putative membrane protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_06_38_12b_curated
hypothetical protein
rifcsplowo2_01_scaffold_21554_3
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(1862..2989)
-----------------
DNA (1128bp)
protein (376aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035F75AC
AsnC family transcriptional regulator; K03718 Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA Tax=RBG_13_Pacearchaeota_36_9_curated
Transcriptional regulator
rifcsplowo2_01_scaffold_21554_4
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

3130..3531
-----------------
DNA (402bp)
protein (134aa)
hypothetical protein n=1 Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B40BCB
hypothetical protein Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsplowo2_01_scaffold_21554_5
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

3506..3925
-----------------
DNA (420bp)
protein (140aa)
hypothetical protein n=1 Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B40BCB
hypothetical protein Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsplowo2_01_scaffold_21554_6
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(3970..5094)
-----------------
DNA (1125bp)
protein (375aa)
hypothetical protein; K07133 Tax=RBG_13_Pacearchaeota_36_9_curated
hypothetical protein; K07133 id=5048636 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsplowo2_01_scaffold_21554_7
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(5207..8284)
-----------------
DNA (3078bp)
protein (1026aa)
UvrD/REP helicase; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12] Tax=CG_Pacearch_03
UvrD/REP helicase n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E6Q7_METEZ
UvrD/REP helicase
rifcsplowo2_01_scaffold_21554_8
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists


comp(8321..9517)
-----------------
DNA (1197bp)
protein (399aa)
Translation initiation factor 2 subunit gamma n=1 Tax=Methanoplanus limicola DSM 2279 RepID=H1Z155_9EURY
translation initiation factor 2 subunit gamma (aeif-2g); K03242 translation initiation factor 2 subunit 3 Tax=CG_Pacearch_06
translation initiation factor 2 subunit gamma (aeif-2g)
rifcsplowo2_01_scaffold_21554_9
unknown

Not on your lists

comp(9563..9859)
-----------------
DNA (297bp)
protein (99aa)

This feature has no annotations

rifcsplowo2_01_scaffold_21554_10
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists


comp(9893..10342)
-----------------
DNA (450bp)
protein (150aa)
30S ribosomal protein S6; K02991 small subunit ribosomal protein S6e Tax=CG_Pacearch_06
SSU ribosomal protein S6E id=5799714 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
30S ribosomal protein S6e
rifcsplowo2_01_scaffold_21554_11
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(10433..12187)
-----------------
DNA (1755bp)
protein (585aa)
Probable translation initiation factor IF-2 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=Q74MW5_NANEQ
translation initiation factor IF-2; K03243 translation initiation factor 5B Tax=CG_Pacearch_06
translation initiation factor IF-2
rifcsplowo2_01_scaffold_21554_12
unknown

Not on your lists

12418..12600
-----------------
DNA (183bp)
protein (61aa)

This feature has no annotations

Displaying 12 items

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