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rifcsplowo2_01_scaffold_11432

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
rifcsplowo2_01_scaffold_11432_1
RIFOXYC2_FULL_PER-ii_58_32_curated, PER-ii, Bacteria

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comp(3..1934)
-----------------
DNA (1932bp)
protein (644aa)
Putative lipoprotein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GGR6_9DELT
hypothetical protein
rifcsplowo2_01_scaffold_11432_2
unknown

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comp(1982..2245)
-----------------
DNA (264bp)
protein (88aa)

This feature has no annotations

rifcsplowo2_01_scaffold_11432_3
Methanosaeta thermophila, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(2963..3568)
-----------------
DNA (606bp)
protein (202aa)
GTP cyclohydrolase II (EC:3.5.4.25)
GTP cyclohydrolase II n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B9M5_METTP
rifcsplowo2_01_scaffold_11432_4
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(3791..4840)
-----------------
DNA (1050bp)
protein (350aa)
diaminohydroxyphosphoribosylaminopyrimidine deaminase, 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC:3.5.4.26 1.1.1.193)
Riboflavin biosynthesis protein RibD id=4677557 bin=GWC2_Deltaproteobacteria_42_51 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
rifcsplowo2_01_scaffold_11432_5
unknown

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4986..5840
-----------------
DNA (855bp)
protein (285aa)

This feature has no annotations

rifcsplowo2_01_scaffold_11432_6
unknown

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6060..6251
-----------------
DNA (192bp)
protein (64aa)

This feature has no annotations

rifcsplowo2_01_scaffold_11432_7

Not on your lists

6233..6667
-----------------
DNA (435bp)
protein (145aa)
Hypothetical conserved protein id=4282539 bin=GWF2_OP3_43_52 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Crenarchaeota tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
hypothetical protein
rifcsplowo2_01_scaffold_11432_8
RBG_13_Euryarchaeota_31_8_curated, Euryarchaeota, Archaea

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comp(6707..9910)
-----------------
DNA (3204bp)
protein (1068aa)
Carbamoylphosphate synthase large subunit id=3139166 bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
carbamoyl phosphate synthase large subunit
rifcsplowo2_01_scaffold_11432_9
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(10039..11112)
-----------------
DNA (1074bp)
protein (358aa)
Carbamoyl-phosphate synthase small chain n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AN91_IGNAJ
carA; carbamoylphosphate synthase small subunit
rifcsplowo2_01_scaffold_11432_10
Methanocella arvoryzae, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(11382..11861)
-----------------
DNA (480bp)
protein (160aa)
glpQ; putative glycerophosphodiester phosphodiesterase (EC:3.1.4.46)
Putative glycerophosphodiester phosphodiesterase n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W287_UNCMA
rifcsplowo2_01_scaffold_11432_11
RBG_16_RIF03_38_10_curated, RIF03, Bacteria

Not on your lists

comp(11904..12833)
-----------------
DNA (930bp)
protein (310aa)
acetylglutamate kinase (EC:2.7.2.8)
Acetylglutamate kinase id=2114295 bin=GWD2_Deltaproteobacteria_55_8 species=Desulfurobacterium thermolithotrophum genus=Desulfurobacterium taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
rifcsplowo2_01_scaffold_11432_12
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

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13157..13792
-----------------
DNA (636bp)
protein (212aa)
hypothetical protein id=5048447 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsplowo2_01_scaffold_11432_13
unknown

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comp(13801..14157)
-----------------
DNA (357bp)
protein (119aa)

This feature has no annotations

rifcsplowo2_01_scaffold_11432_14
Halothermothrix orenii, Halothermothrix, Halanaerobiales, Clostridia, Firmicutes, Bacteria

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comp(14159..14764)
-----------------
DNA (606bp)
protein (202aa)
3,4-dihydroxy-2-butanone 4-phosphate synthase (EC:3.5.4.25)
Riboflavin biosynthesis protein RibBA n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=B8CWT8_HALOH
Displaying 14 items

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