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rifcsplowo2_01_scaffold_22951

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_22951_1

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comp(2..217)
DNA (216bp) protein (72aa)
S-adenosylmethionine synthetase (EC:2.5.1.6)
Marine sediment metagenome DNA, contig: S01H1_S20165 {ECO:0000313|EMBL:GAG27235.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
S-adenosylmethionine synthase id=5800631 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsplowo2_01_scaffold_22951_2
unknown

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comp(284..778)
DNA (495bp) protein (165aa)

This feature has no annotations

rifcsplowo2_01_scaffold_22951_3

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980..1531
DNA (552bp) protein (184aa)
XRE family transcriptional regulator id=5044639 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
XRE family transcriptional regulator {ECO:0000313|EMBL:KHO46373.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
putative transcription regulator, containing CBS protein
rifcsplowo2_01_scaffold_22951_4
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(1581..2444)
DNA (864bp) protein (288aa)
phosphoserine phosphatase serb (EC:3.1.3.3); K01079 phosphoserine phosphatase [EC:3.1.3.3] Tax=CG_Woesearch_02
Uncharacterized protein (Fragment) n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6VV32_9EURY
phosphoserine phosphatase
rifcsplowo2_01_scaffold_22951_5
BJP_IG2102_Methanoregula_52_95, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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comp(2520..2825)
DNA (306bp) protein (102aa)
50S ribosomal protein L12 n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6WM01_9EURY
rpl12p; 50S ribosomal protein L12; K02869 large subunit ribosomal protein L12 Tax=BJP_IG2102_Methanoregula_52_95
50S ribosomal protein L12
rifcsplowo2_01_scaffold_22951_6

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comp(2985..3827)
DNA (843bp) protein (281aa)
rplP0; acidic ribosomal protein P0; K02864 large subunit ribosomal protein L10 id=5047525 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00280}; Acidic ribosomal protein P0 homolog {ECO:0000256|HAMAP-Rule:MF_00280}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rplP0; acidic ribosomal protein P0
rifcsplowo2_01_scaffold_22951_7

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comp(3827..4468)
DNA (642bp) protein (214aa)
rpl1P; 50S ribosomal protein L1P; K02863 large subunit ribosomal protein L1 id=5047524 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Large subunit ribosomal protein L1 {ECO:0000313|EMBL:KHO45733.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
50S ribosomal protein L1
rifcsplowo2_01_scaffold_22951_8
unknown

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comp(4638..4787)
DNA (150bp) protein (50aa)

This feature has no annotations

rifcsplowo2_01_scaffold_22951_9
unknown

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comp(4787..4945)
DNA (159bp) protein (53aa)

This feature has no annotations

rifcsplowo2_01_scaffold_22951_10
Methanohalobium evestigatum, Methanohalobium, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(5048..5479)
DNA (432bp) protein (144aa)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E5R9_METEZ
FKBP-type peptidylprolyl isomerase
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU004231}; TaxID=644295 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanohalobium.;" source="Me
rifcsplowo2_01_scaffold_22951_11
unknown

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comp(5633..6061)
DNA (429bp) protein (143aa)

This feature has no annotations

rifcsplowo2_01_scaffold_22951_12
AR9, Woesearchaeaota, DPANN, Archaea

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comp(6054..7220)
DNA (1167bp) protein (389aa)
Tax=AR9
rifcsplowo2_01_scaffold_22951_13
unknown

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comp(7263..8003)
DNA (741bp) protein (247aa)

This feature has no annotations

rifcsplowo2_01_scaffold_22951_14
unknown

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comp(8000..8311)
DNA (312bp) protein (104aa)

This feature has no annotations

Displaying 14 items

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