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rifcsplowo2_01_scaffold_11

Search features with annotation key words

Displaying items 1-30 of 541 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_11_1

Not on your lists

comp(18..482)
DNA (465bp) protein (155aa)
Transposase n=1 Tax=mine drainage metagenome RepID=T0ZYP0_9ZZZZ
Transposase {ECO:0000313|EMBL:EQD49712.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
transposase
rifcsplowo2_01_scaffold_11_2
CG_Micra_02, Micraarchaeota, Archaea

Not on your lists

comp(590..1387)
DNA (798bp) protein (266aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037D30C4
integrase Tax=CG_Micra_02
integrase family protein
rifcsplowo2_01_scaffold_11_3
AR10, Diapherotrites, DPANN, Archaea

Not on your lists


comp(1580..3040)
DNA (1461bp) protein (487aa)
glycyl-tRNA synthetase (EC:6.1.1.14)
glycyl-tRNA synthetase (EC:6.1.1.14); K01880 glycyl-tRNA synthetase [EC:6.1.1.14] Tax=AR10
glycyl-tRNA synthetase (EC:6.1.1.14); K01880 glycyl-tRNA synthetase [EC:6.1.1.14] id=5240553 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsplowo2_01_scaffold_11_4
unknown

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3408..3779
DNA (372bp) protein (124aa)

This feature has no annotations

rifcsplowo2_01_scaffold_11_5
Pelotomaculum thermopropionicum, Pelotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3760..4173)
DNA (414bp) protein (138aa)
Uncharacterized conserved protein n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D4S3_PELTS
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:BAF58746.1}; TaxID=370438 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Pelotomaculum.;" source="Pelotomaculum thermopro
rifcsplowo2_01_scaffold_11_6
Monoraphidium neglectum, Monoraphidium, Sphaeropleales, Chlorophyceae, Chlorophyta, Viridiplantae

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comp(4218..4982)
DNA (765bp) protein (255aa)
Acetylglutamate kinase {ECO:0000313|EMBL:KIZ05081.1}; EC=2.7.2.8 {ECO:0000313|EMBL:KIZ05081.1};; TaxID=145388 species="Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Selenastrac
hypothetical protein n=1 Tax=Candidatus Microthrix parvicella RepID=UPI0003800544
N-acetylglutamate kinase
rifcsplowo2_01_scaffold_11_7
R_Elusimicrobia_60_11, Elusimicrobia, Bacteria

Not on your lists

comp(4994..5941)
DNA (948bp) protein (316aa)
N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38); K00145 N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_60_11_curated
argC; N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Methanothermococcus thermolithotrophicus RepID=UPI00037426A4
rifcsplowo2_01_scaffold_11_8
RBG_16_RIF03_38_10_curated, RIF03, Bacteria

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comp(5938..7113)
DNA (1176bp) protein (392aa)
acetylornithine/succinyldiaminopimelate aminotransferase (EC:2.6.1.11); K00821 acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] Tax=RBG_16_RIF03_38_10_curated
argD; acetylornithine and succinylornithine aminotransferase (EC:2.6.1.17 2.6.1.11)
Acetylornithine aminotransferase n=1 Tax=Pelosinus fermentans JBW45 RepID=I9D9E3_9FIRM
rifcsplowo2_01_scaffold_11_9
Thermacetogenium phaeum, Thermacetogenium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(7110..8291)
DNA (1182bp) protein (394aa)
argJ; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein (EC:2.3.1.35 2.3.1.1)
Arginine biosynthesis bifunctional protein ArgJ n=1 Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LI93_THEPS
Arginine biosynthesis bifunctional protein ArgJ {ECO:0000256|HAMAP-Rule:MF_01106}; TaxID=1089553 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermacetog
rifcsplowo2_01_scaffold_11_10
Pyrococcus sp. NA2, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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comp(8353..9252)
DNA (900bp) protein (300aa)
Ornithine carbamoyltransferase, catabolic {ECO:0000256|HAMAP-Rule:MF_01109}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109};; TaxID=342949 species="Archa
Ornithine carbamoyltransferase, catabolic n=1 Tax=Pyrococcus sp. (strain NA2) RepID=F4HII5_PYRSN
ornithine carbamoyltransferase
rifcsplowo2_01_scaffold_11_11
CG_Desulfob_01, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9239..10606)
DNA (1368bp) protein (456aa)
argininosuccinate lyase (EC:4.3.2.1); K01755 argininosuccinate lyase [EC:4.3.2.1] Tax=CG_Desulfob_01
argininosuccinate lyase (EC:4.3.2.1)
Argininosuccinate lyase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CE80_THET1
rifcsplowo2_01_scaffold_11_12
Deferribacter desulfuricans, Deferribacter, Deferribacterales, Deferribacteres, Deferribacteres, Bacteria

Not on your lists

comp(10611..11840)
DNA (1230bp) protein (410aa)
argG; argininosuccinate synthase (EC:6.3.4.5)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00013047}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase
Argininosuccinate synthase n=1 Tax=Deferribacter desulfuricans (strain DSM 14783 / JCM 11476 / NBRC 101012 / SSM1) RepID=D3P8P5_DEFDS
rifcsplowo2_01_scaffold_11_13

Not on your lists

11952..12581
DNA (630bp) protein (210aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO53487.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
Conserved archaeal protein, aspartokinase domain protein id=5800470 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsplowo2_01_scaffold_11_14
BJP_IG2102_Methanoregula_52_95, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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comp(12588..13028)
DNA (441bp) protein (147aa)
Putative uncharacterized protein n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CMI4_DESK7
twitching motility protein PilT Tax=BJP_IG2102_Methanoregula_52_95
hypothetical protein
rifcsplowo2_01_scaffold_11_15
BJP_IG2102_Methanoregula_52_95, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(12985..13278)
DNA (294bp) protein (98aa)
hypothetical protein Tax=BJP_IG2102_Methanoregula_52_95
rifcsplowo2_01_scaffold_11_16

Not on your lists

13373..13945
DNA (573bp) protein (191aa)
Marine sediment metagenome DNA, contig: S03H2_L02382 {ECO:0000313|EMBL:GAH45233.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
hypothetical protein
Uncharacterized protein id=5241122 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsplowo2_01_scaffold_11_17
unknown

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comp(13923..14090)
DNA (168bp) protein (56aa)

This feature has no annotations

rifcsplowo2_01_scaffold_11_18
Archaeoglobus profundus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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14375..14779
DNA (405bp) protein (135aa)
Transcriptional modulator of MazE/toxin, MazF n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RF40_ARCPA
MazF family transcriptional regulator
Transcriptional modulator of MazE/toxin, MazF {ECO:0000313|EMBL:ADB58734.1}; TaxID=572546 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Arc
rifcsplowo2_01_scaffold_11_19

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comp(14785..15927)
DNA (1143bp) protein (381aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO46331.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
hypothetical protein id=5044597 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsplowo2_01_scaffold_11_20

Not on your lists

16418..17368
DNA (951bp) protein (317aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003773F90
Marine sediment metagenome DNA, contig: S06H3_S00013 {ECO:0000313|EMBL:GAI32157.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
filamentation induced by cAMP protein fic
rifcsplowo2_01_scaffold_11_21
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(17460..18071)
DNA (612bp) protein (204aa)
hypothetical protein
Putative uncharacterized protein id=5241861 bin=GW2011_AR10_complete species=Candidatus Parvarchaeum acidiphilum genus=Candidatus Parvarchaeum taxon_order=unknown taxon_class=unknown phylum=Euryarchaeota tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Putative uncharacterized protein Tax=AR10
rifcsplowo2_01_scaffold_11_22

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comp(18068..18715)
DNA (648bp) protein (216aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF60853.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
hypothetical protein id=5241862 bin=GW2011_AR10_complete species=Candidatus Korarchaeum cryptofilum genus=Candidatus Korarchaeum taxon_order=unknown taxon_class=unknown phylum=Korarchaeota tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsplowo2_01_scaffold_11_23
Methanocella conradii, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

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19164..21947
DNA (2784bp) protein (928aa)
Putative type IV restriction endonuclease n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8IB27_METCZ rbh
type IV restriction endonuclease
Putative type IV restriction endonuclease {ECO:0000313|EMBL:AFD01037.1}; TaxID=1041930 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Meth
rifcsplowo2_01_scaffold_11_24
unknown

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21947..22156
DNA (210bp) protein (70aa)

This feature has no annotations

rifcsplowo2_01_scaffold_11_25
GWA2_Melainabacteria_34_9_curated, Melainabacteria, Bacteria

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22217..23440
DNA (1224bp) protein (408aa)
DNA methylase N-4/N-6 domain-containing protein Tax=GWA2_Melainabacteria_34_9_curated
N(4)-cytosine-specific methyltransferase BsoBI id=3929720 bin=GWF2_Nitrospirae_44_13 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
hypothetical protein
rifcsplowo2_01_scaffold_11_26
GWA2_Melainabacteria_34_9_curated, Melainabacteria, Bacteria

Not on your lists

comp(23411..24547)
DNA (1137bp) protein (379aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RCJ0_PHEZH
hypothetical protein Tax=GWA2_Melainabacteria_34_9_curated
hypothetical protein
rifcsplowo2_01_scaffold_11_27
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24544..25584)
DNA (1041bp) protein (347aa)
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
rifcsplowo2_01_scaffold_11_28
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

comp(25760..26122)
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036CDCF0
hypothetical protein Tax=CG_Woesearch_03
hypothetical protein
rifcsplowo2_01_scaffold_11_29
unknown

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26363..27076
DNA (714bp) protein (238aa)

This feature has no annotations

rifcsplowo2_01_scaffold_11_30
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

27089..27562
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Bacillus cereus HuA2-3 RepID=R8LX91_BACCE
Uncharacterized protein {ECO:0000313|EMBL:EOP26153.1}; TaxID=1053202 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus HuA2-3.
hypothetical protein
Displaying items 1-30 of 541 in total

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