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rifcsplowo2_01_scaffold_2550

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_2550_1
unknown

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comp(2..394)
DNA (393bp) protein (131aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2550_2
AR13, Pacearchaeaota, DPANN, Archaea

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574..1317
DNA (744bp) protein (248aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037A6C08
Transcriptional regulator TrmB Tax=AR13
putative transcriptional regulator
rifcsplowo2_01_scaffold_2550_3

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comp(1382..7738)
DNA (6357bp) protein (2119aa)
Aldehyde dehydrogenase family 1 member L2, mitochondrial n=1 Tax=Tupaia chinensis RepID=L9LD01_TUPCH
KP-43 peptidase {ECO:0000313|EMBL:KHO55349.1}; TaxID=1579377 species="Archaea.;" source="archaeon GW2011_AR19.;"
rifcsplowo2_01_scaffold_2550_4

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comp(7743..8303)
DNA (561bp) protein (187aa)
Transcriptional regulator, ArsR family n=1 Tax=Paenibacillus sp. HGF5 RepID=F3M8M0_9BACL
Marine sediment metagenome DNA, contig: S01H1_S37646 {ECO:0000313|EMBL:GAG53245.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
transcriptional regulator, ArsR family protein
rifcsplowo2_01_scaffold_2550_5
Paenibacillus sp. HGF7, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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8466..9386
DNA (921bp) protein (307aa)
Metalloenzyme superfamily n=2 Tax=Paenibacillus RepID=F5LNW1_9BACL
Metalloenzyme superfamily {ECO:0000313|EMBL:EGL15843.1}; TaxID=944559 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. HGF7.;"
type I phosphodiesterase/nucleotide pyrophosphatase
rifcsplowo2_01_scaffold_2550_6
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(9378..10352)
DNA (975bp) protein (325aa)
gtp1/obg family GTP-binding protein Tax=RBG_13_Woesearchaeota_36_6_curated
Small GTP-binding protein id=5800537 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
gtp1/obg family GTP-binding protein
rifcsplowo2_01_scaffold_2550_7
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(10405..10938)
DNA (534bp) protein (178aa)
GCN5-like N-acetyltransferase; K00676 ribosomal-protein-alanine N-acetyltransferase [EC:2.3.1.128] id=5091728 bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
GCN5-related N-acetyltransferase
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:AIC15882.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitroso
rifcsplowo2_01_scaffold_2550_8
R_OD1_Falkowbacteria_39_17, Falkowbacteria, Parcubacteria, Bacteria

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comp(10943..12652)
DNA (1710bp) protein (570aa)
sodium/hydrogen exchanger Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_39_17_curated
sodium/hydrogen exchanger id=5043948 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
sodium/hydrogen exchanger
rifcsplowo2_01_scaffold_2550_9
R_Saccharibacteria_47_12, Candidatus Saccharibacteria, Bacteria

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comp(12727..13062)
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035F5946
export-related chaperone CsaA; K06878 tRNA-binding protein Tax=RIFCSPHIGHO2_02_FULL_Saccharibacteria_47_12_curated
csaA; export chaperone protein CsaA
rifcsplowo2_01_scaffold_2550_10
Microgenomates bacterium GW2011_GWC1_39_12, Microgenomates, Bacteria

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13184..13852
DNA (669bp) protein (223aa)
id=4761605 bin=PER_GWC2_41_7 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
Uncharacterized protein {ECO:0000313|EMBL:KKR01798.1}; TaxID=1618514 species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWC1_39_12.;"
rifcsplowo2_01_scaffold_2550_11
R_OD1_Falkowbacteria_39_17, Falkowbacteria, Parcubacteria, Bacteria

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13885..15090
DNA (1206bp) protein (402aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037B1CCA
hypothetical protein; K08971 putative membrane protein Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_39_17_curated
hypothetical protein
rifcsplowo2_01_scaffold_2550_12
unknown

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comp(15273..16148)
DNA (876bp) protein (292aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2550_13

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comp(16163..17698)
DNA (1536bp) protein (512aa)
ski2-type helicase; K03726 helicase [EC:3.6.4.-] id=5045823 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Helicase {ECO:0000313|EMBL:KHO46436.1}; EC=3.6.4.- {ECO:0000313|EMBL:KHO46436.1};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
ski2-like helicase
rifcsplowo2_01_scaffold_2550_14
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(17803..20124)
DNA (2322bp) protein (774aa)
UPI0003D1C796 related cluster n=1 Tax=unknown RepID=UPI0003D1C796
subtilisin-like serine protease Tax=CG_Woesearch_02
Ig family protein
rifcsplowo2_01_scaffold_2550_15
Parcubacteria bacterium GW2011_GWA2_46_7, Parcubacteria, Bacteria

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comp(20179..21234)
DNA (1056bp) protein (352aa)
UPI0003D1A86A related cluster n=1 Tax=unknown RepID=UPI0003D1A86A
Ig family protein {ECO:0000313|EMBL:KKU43483.1}; TaxID=1618837 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_46_7.;"
hypothetical protein
rifcsplowo2_01_scaffold_2550_16

Not on your lists

comp(21387..22073)
DNA (687bp) protein (229aa)
NAD(P)H-hydrate epimerase n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DG47_9EURY
Marine sediment metagenome DNA, contig: S01H1_S30658 {ECO:0000313|EMBL:GAG32627.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
carbohydrate kinase
rifcsplowo2_01_scaffold_2550_17
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(22150..22821)
DNA (672bp) protein (224aa)
Tax=CG_Pacearch_06
rifcsplowo2_01_scaffold_2550_18
[Clostridium] sticklandii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23061..23468)
DNA (408bp) protein (136aa)
Putative uncharacterized protein n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PRG0_CLOSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH21464.1}; TaxID=499177 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sticklandii
rifcsplowo2_01_scaffold_2550_19
unknown

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23576..24589
DNA (1014bp) protein (338aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2550_20
BJP_IG2158_Thermincola_46_17, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24691..26499
DNA (1809bp) protein (603aa)
DNA mismatch repair protein MutL n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12VD0_METBU
DNA mismatch repair protein MutL
Tax=BJP_IG2158_Thermincola_46_17
rifcsplowo2_01_scaffold_2550_21
R_RIF_OD1_06_42_22, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists


26650..27993
DNA (1344bp) protein (448aa)
signal recognition particle Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_06_42_22_curated
Signal recognition particle 54 kDa protein id=5800735 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
SRP54-type protein, GTPase protein
Displaying 21 items

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