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rifcsplowo2_01_scaffold_10025

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_10025_1
unknown

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1..1497
DNA (1497bp) protein (499aa)
Proline--tRNA ligase n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DI64_9EURY id=5102935 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Proline--tRNA ligase n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DI64_9EURY Tax=AR20
Proline-tRNA ligase
rifcsplowo2_01_scaffold_10025_2
unknown

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1545..2369
DNA (825bp) protein (275aa)

This feature has no annotations

rifcsplowo2_01_scaffold_10025_3
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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2607..3266
DNA (660bp) protein (220aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000362D490
Bacterio-opsin activator HTH domain-containing protein; K06930 Tax=RBG_13_Pacearchaeota_36_9_curated
hypothetical protein
rifcsplowo2_01_scaffold_10025_4
unknown

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3328..3918
DNA (591bp) protein (197aa)

This feature has no annotations

rifcsplowo2_01_scaffold_10025_5
AR9, Woesearchaeaota, DPANN, Archaea

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comp(4020..4553)
DNA (534bp) protein (178aa)
id=5041692 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR9
rifcsplowo2_01_scaffold_10025_6
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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4720..5175
DNA (456bp) protein (152aa)
NMD3 family protein; K07562 nonsense-mediated mRNA decay protein 3 Tax=RBG_13_Woesearchaeota_36_6_curated
NMD3-related protein (nonsense mediated mRNA decay); K07562 nonsense-mediated mRNA decay protein 3 id=5043728 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
NMD3 family protein
rifcsplowo2_01_scaffold_10025_7
unknown

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5227..6492
DNA (1266bp) protein (422aa)

This feature has no annotations

rifcsplowo2_01_scaffold_10025_8
unknown

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comp(6524..6856)
DNA (333bp) protein (111aa)

This feature has no annotations

rifcsplowo2_01_scaffold_10025_9
GWC2_Pelobacteraceae_58_13_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6862..7917)
DNA (1056bp) protein (352aa)
Phospholipase, patatin family, putative id=3523189 bin=GWC2_Pelobacter_58_13 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
alpha-beta hydrolase family esterase; K07001 NTE family protein Tax=GWC2_Pelobacteraceae_58_13_curated
patatin
rifcsplowo2_01_scaffold_10025_10
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

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8134..8790
DNA (657bp) protein (219aa)
Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
rifcsplowo2_01_scaffold_10025_11
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

9203..11035
DNA (1833bp) protein (611aa)
serine protease-like protein; K06870 uncharacterized protein Tax=CG_Woesearch_02
serine protease; K06870 uncharacterized protein id=5049207 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
serine protease
rifcsplowo2_01_scaffold_10025_12
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

11224..11961
DNA (738bp) protein (246aa)
MarR family transcriptional regulator Tax=AR9
Putative membrane-associated protein/domain protein id=5799953 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
MarR family transcriptional regulator
rifcsplowo2_01_scaffold_10025_13

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comp(11967..12344)
DNA (378bp) protein (126aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO51893.1}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
id=5049518 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rifcsplowo2_01_scaffold_10025_14

Not on your lists

comp(12341..12886)
DNA (546bp) protein (182aa)
hypothetical protein id=5049517 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Uncharacterized protein {ECO:0000313|EMBL:KHO53853.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
rifcsplowo2_01_scaffold_10025_15
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(13020..13397)
DNA (378bp) protein (126aa)
hypothetical protein Tax=CG_Pacearch_03
hypothetical protein id=5050138 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsplowo2_01_scaffold_10025_16
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(13394..13651)
DNA (258bp) protein (86aa)
Putative uncharacterized protein n=1 Tax=Methanococcus maripaludis RepID=G0H4T0_METMI id=5103799 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein Tax=CG_Pacearch_03
hypothetical protein
Displaying 16 items

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