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rifcsplowo2_01_scaffold_8220

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_8220_1
unknown

Not on your lists

203..1123
DNA (921bp) protein (307aa)
hypothetical protein
rifcsplowo2_01_scaffold_8220_2
unknown

Not on your lists

1134..1535
DNA (402bp) protein (134aa)

This feature has no annotations

rifcsplowo2_01_scaffold_8220_3
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1543..2586)
DNA (1044bp) protein (348aa)
hypothetical protein n=1 Tax=unclassified Crenarchaeota (miscellaneous) RepID=UPI00036185D0
hypothetical protein Tax=RBG_16_Deltaproteobacteria_54_11_curated
hypothetical protein
rifcsplowo2_01_scaffold_8220_4
unknown

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2713..3216
DNA (504bp) protein (168aa)

This feature has no annotations

rifcsplowo2_01_scaffold_8220_5
unknown

Not on your lists

comp(3364..3795)
DNA (432bp) protein (144aa)

This feature has no annotations

rifcsplowo2_01_scaffold_8220_6
RBG_16_Planctomycetes_59_8_curated, Planctomycetes, Bacteria

Not on your lists

comp(3922..5238)
DNA (1317bp) protein (439aa)
aspartate kinase (EC:2.7.2.4) Tax=RBG_16_Planctomycetes_59_8_curated
aspartate kinase (EC:2.7.2.4)
hypothetical protein n=2 Tax=unclassified Crenarchaeota RepID=UPI0003791EAE
rifcsplowo2_01_scaffold_8220_7
GWF2_Lentisphaerae_45_14_curated, Lentisphaerae, Bacteria

Not on your lists

comp(5293..6105)
DNA (813bp) protein (271aa)
chorismate mutase (EC:5.4.99.5) Tax=GWF2_Lentisphaerae_45_14_curated
chorismate mutase (EC:5.4.99.5)
Chorismate mutase n=1 Tax=delta proteobacterium NaphS2 RepID=D8EXL0_9DELT
rifcsplowo2_01_scaffold_8220_8

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comp(6172..7830)
DNA (1659bp) protein (553aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00177}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00177};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00177}; TaxID=1579373 species="Archaea.;" source=
lysyl-tRNA synthetase (EC:6.1.1.6)
Lysine--tRNA ligase id=5799840 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsplowo2_01_scaffold_8220_9
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(7866..8723)
DNA (858bp) protein (286aa)
Putative uncharacterized protein id=2698744 bin=PER_GWC2_41_7 species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
filamentation induced by cAMP protein Fic Tax=CG_Woesearch_01
hypothetical protein
rifcsplowo2_01_scaffold_8220_10
Candidatus Kuenenia stuttgartiensis, Candidatus Kuenenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(8842..10017)
DNA (1176bp) protein (392aa)
Similar to N-succinyldiaminopimelate aminotransferase {ECO:0000313|EMBL:CAJ74692.1}; EC=2.6.1.17 {ECO:0000313|EMBL:CAJ74692.1};; TaxID=174633 species="Bacteria; Planctomycetes; Planctomycetia; Candida
Similar to N-succinyldiaminopimelate aminotransferase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q3U7_9BACT
diaminopimelate aminotransferase
rifcsplowo2_01_scaffold_8220_11
Methanococcoides methylutens, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(10019..11314)
DNA (1296bp) protein (432aa)
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HA
Diaminopimelate decarboxylase n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TSR9_METAC
lysA; diaminopimelate decarboxylase
rifcsplowo2_01_scaffold_8220_12
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(11383..12270)
DNA (888bp) protein (296aa)
Dihydrodipicolinate synthase; K01714 dihydrodipicolinate synthase [EC:4.2.1.52] Tax=RBG_16_Spirochaete_67_19_curated
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C848_DESTA
dihydrodipicolinate synthase
rifcsplowo2_01_scaffold_8220_13
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

comp(12273..13025)
DNA (753bp) protein (251aa)
dihydrodipicolinate reductase (EC:1.3.1.26); K00215 dihydrodipicolinate reductase [EC:1.3.1.26] Tax=CG_Woesearch_03
hypothetical protein n=1 Tax=candidate division YNPFFA RepID=UPI000373A4F5
dihydrodipicolinate reductase
rifcsplowo2_01_scaffold_8220_14
RBG_13_Euryarchaeota_31_8_curated, Euryarchaeota, Archaea

Not on your lists

13090..13752
DNA (663bp) protein (221aa)
Putative uncharacterized protein n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1R555_SPISS
hypothetical protein Tax=RBG_13_Euryarchaeota_31_8_curated
hypothetical protein
rifcsplowo2_01_scaffold_8220_15
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

13754..13972
DNA (219bp) protein (73aa)
Uncharacterized protein n=2 Tax=Methanosarcina mazei RepID=M1Q6H1_METMZ
hypothetical protein Tax=RBG_16_Pacearchaeota_35_8_curated
hypothetical protein
rifcsplowo2_01_scaffold_8220_16
GWA2_OD1_Kaiserbacteria_50_9_curated, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

comp(14282..15148)
DNA (867bp) protein (289aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003719623
zinc/iron permease Tax=GWA2_OD1_Kaiserbacteria_50_9_curated
hypothetical protein
rifcsplowo2_01_scaffold_8220_17
Thermoplasmatales archaeon SCGC AB-540-F20, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

15205..15621
DNA (417bp) protein (139aa)
Putative transcriptional regulator with CopG/Arc/MetJ DNA-binding domain and metal-binding domain n=1 Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7T9Q9_9EURY
Putative transcriptional regulator with CopG/Arc/MetJ DNA-binding domain and metal-binding domain {ECO:0000313|EMBL:EMR75504.1}; TaxID=1242866 species="Archaea; Euryarchaeota; Thermoplasmata; Thermopl
transcriptional regulator, CopG family
rifcsplowo2_01_scaffold_8220_18

Not on your lists

comp(15618..15962)
DNA (345bp) protein (115aa)
Peptidyl-tRNA hydrolase, PTH2 family {ECO:0000313|EMBL:KHO50116.1}; EC=3.1.1.29 {ECO:0000313|EMBL:KHO50116.1};; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
peptidyl-tRNA hydrolase (EC:3.1.1.29); K04794 peptidyl-tRNA hydrolase, PTH2 family [EC:3.1.1.29] id=5043642 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
peptidyl-tRNA hydrolase (EC:3.1.1.29)
rifcsplowo2_01_scaffold_8220_19

Not on your lists

comp(16063..17136)
DNA (1074bp) protein (358aa)
Putative leucyl aminopeptidase n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LIM9_THEBM
Uncharacterized protein {ECO:0000313|EMBL:KHO51148.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
leucyl aminopeptidase
rifcsplowo2_01_scaffold_8220_20

Not on your lists

17238..17903
DNA (666bp) protein (222aa)
HAD superfamily (Subfamily IA) hydrolase, TIGR02253 {ECO:0000313|EMBL:KHO53415.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
hypothetical protein
HAD superfamily (subfamily IA) hydrolase, TIGR02253; K07025 putative hydrolase of the HAD superfamily id=5241563 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsplowo2_01_scaffold_8220_21
RIFOXYB2_FULL_WOR_2_38_16_curated, WOR-2, Bacteria

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18023..18172
DNA (150bp) protein (50aa)
id=2740044 bin=GWF2_OP3_38_59 species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
id=2740044 Tax=RIFOXYB2_FULL_WOR_2_38_16_curated
rifcsplowo2_01_scaffold_8220_22
unknown

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18226..18351
DNA (126bp) protein (42aa)

This feature has no annotations

rifcsplowo2_01_scaffold_8220_23
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18629..19135
DNA (507bp) protein (169aa)
PBP family phospholipid-binding protein; K06910 Tax=RBG_13_Deltaproteobacteria_52_11_curated
PEBP family protein id=1718107 bin=GWB2_Deltaproteobacteria_65_81 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
rifcsplowo2_01_scaffold_8220_24
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

19300..19824
DNA (525bp) protein (175aa)
transcription factor IIE (TFIIE) subunit alpha; K03136 transcription initiation factor TFIIE subunit alpha Tax=RBG_13_Woesearchaeota_36_6_curated
transcription factor E; K03136 transcription initiation factor TFIIE subunit alpha id=5041815 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Transcription factor E
rifcsplowo2_01_scaffold_8220_25
unknown

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comp(19821..19994)
DNA (174bp) protein (58aa)

This feature has no annotations

rifcsplowo2_01_scaffold_8220_26
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

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20300..20566
DNA (267bp) protein (89aa)
MtN3 and saliva related transmembrane protein (modular protein) Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
MtN3 and saliva related transmembrane protein id=5035142 bin=GWA2_Bacteroidetes_33_15 species=Niabella soli genus=Niabella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_33_15 organism_group=Bacteroidetes
hypothetical protein
rifcsplowo2_01_scaffold_8220_27
RBG_19FT_COMBO_OP11_43_10_curated, Microgenomates, Bacteria

Not on your lists

comp(20586..21530)
DNA (945bp) protein (315aa)
hypothetical protein; K09799 hypothetical protein Tax=RBG_19FT_COMBO_OP11_43_10_curated
hypothetical protein; K09799 hypothetical protein id=5098398 bin=PER_GWF2_43_18 species=PER_GWF2_42_17 genus=PER_GWF2_42_17 taxon_order=PER_GWF2_42_17 taxon_class=PER_GWF2_42_17 phylum=PER tax=PER_GWF2_43_18 organism_group=PER (Peregrinibacteria)
hypothetical protein
rifcsplowo2_01_scaffold_8220_28
unknown

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comp(21686..22078)
DNA (393bp) protein (131aa)

This feature has no annotations

rifcsplowo2_01_scaffold_8220_29
unknown

Not on your lists

comp(22294..22593)
DNA (300bp) protein (100aa)

This feature has no annotations

rifcsplowo2_01_scaffold_8220_30
unknown

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comp(22687..23499)
DNA (813bp) protein (271aa)

This feature has no annotations

Displaying items 1-30 of 38 in total

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