ggKbase home page

rifcsplowo2_01_scaffold_12134_23

Organism: RIFCSPLOWO2_01_FULL_Archaea_Woesearchaeota_50_16

partial RP 33 / 55 MC: 5 BSCG 6 / 51 ASCG 26 / 38
Location: comp(15311..16090)

Top 3 Functional Annotations

Value Algorithm Source
3'-5' exoribonuclease {ECO:0000313|EMBL:KKU44649.1}; TaxID=1618502 species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWA2_46_7.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.7
  • Coverage: 259.0
  • Bit_score: 364
  • Evalue 1.20e-97
Ribosomal RNA-processing protein RRP42 id=5800801 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized similarity UNIREF
DB: UNIREF100
  • Identity: 58.7
  • Coverage: 254.0
  • Bit_score: 307
  • Evalue 9.70e-81
Ribosomal RNA-processing protein RRP42 similarity KEGG
DB: KEGG
  • Identity: 53.4
  • Coverage: 253.0
  • Bit_score: 270
  • Evalue 4.80e-70

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWA2_OP11_46_7 → Microgenomates → Bacteria

Sequences

DNA sequence
Length: 780
ATGTACAACGAATTACGAAGCCATGTGCTCAAGCTGTTGAAAGCAGATACCCGGCTGGACGGACGCCGTGCGACCGAATACCGGGAACCCATCAAGGTAGAACAGGGCATCATATGCACCGCGGAAGGCTCTGCCCGCGTCACGATCGGCGGCACGCAGGTGATGGTAGGCGTCAAGCTGGAGATCGGCGAACCGTTCCCGGACAGGCCGGACGAAGGCACCATCATGGTGGGCGCTGAACTGTTGCCGCTCTCCAATCCAGACTTTGAGCTGGGGCCCCCAAGCATACAGGCGGTTGAGCTGGCCCGGGTCGTGGACCGCGGCATACGGGAGTCCAAGGCCGTCGATTTCAAGAGCCTCTGCATCGAGCCCGGAGAGAAGGTGTGGCTGGTGATCATCGACATCTGCCCCATCAACGATGCCGGCAATTTATTTGACGCATCGGCGCTGGCGGCATTGGCAGCCCTCAAGAACACGCGCTTCCCGAAGGTGGAAGACGGAAAAATCAGCTACAAAGAGAAGACCAACAAGGGCATGAAAGTGGTCAAGGATCCGGTCAGCGTCACGGTCTGCAAGGTGGGCGATGCGCTCATCGTGGATCCCCTGACCGAAGAGGAAAAGATCATTGATGCCCGCCTGACCGTGGCCTCGACCGCAGACGGCACGCTTTGTGCGCTGCAGAAAGGCGGCAGCATGCCGTTATCCGTAGAGGACGTGGAGAAGATGGTGGCCATCGGCATCTCCAAAGGCAAAGAGCTCCGGGTAGCGCTCGAAAGGTGA
PROTEIN sequence
Length: 260
MYNELRSHVLKLLKADTRLDGRRATEYREPIKVEQGIICTAEGSARVTIGGTQVMVGVKLEIGEPFPDRPDEGTIMVGAELLPLSNPDFELGPPSIQAVELARVVDRGIRESKAVDFKSLCIEPGEKVWLVIIDICPINDAGNLFDASALAALAALKNTRFPKVEDGKISYKEKTNKGMKVVKDPVSVTVCKVGDALIVDPLTEEEKIIDARLTVASTADGTLCALQKGGSMPLSVEDVEKMVAIGISKGKELRVALER*