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rifcsplowo2_01_scaffold_12134

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_12134_1

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comp(1..309)
DNA (309bp) protein (103aa)
Coenzyme F420-reducing hydrogenase subunit alpha {ECO:0000313|EMBL:KKS98158.1}; TaxID=1618443 species="Bacteria; Microgenomates.;" source="Microgenomates (Gottesmanbacteria) bacterium GW2011_GWA2_43_1
coenzyme F420-reducing hydrogenase subunit alpha id=5084412 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
hydrogenase/sulfur reductase, alpha subunit
rifcsplowo2_01_scaffold_12134_2
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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comp(282..605)
DNA (324bp) protein (108aa)
nickel-dependent hydrogenase large subunit Tax=RBG_16_Micrarchaeota_36_9_curated
hydrogenase/sulfur reductase, alpha subunit
hydrogenase/sulfur reductase, alpha subunit id=5240634 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsplowo2_01_scaffold_12134_3

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comp(602..1084)
DNA (483bp) protein (161aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT46039.1}; TaxID=1618929 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_44_17.;"
hydD; hydrogenase/sulfur reductase subunit delta id=14424147 bin=bin11_novelCP species=ACD57 genus=ACD57 taxon_order=ACD57 taxon_class=ACD57 phylum=OP11 tax=bin11_novelCP organism_group=Unknown_CP
NADH ubiquinone oxidoreductase 20 kDa subunit
rifcsplowo2_01_scaffold_12134_4
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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1136..2056
DNA (921bp) protein (307aa)
hypothetical protein Tax=RBG_13_Woesearchaeota_36_6_curated
hypothetical protein id=5048722 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsplowo2_01_scaffold_12134_5

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comp(2019..2558)
DNA (540bp) protein (180aa)
id=5048721 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45384.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsplowo2_01_scaffold_12134_6

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comp(2770..3084)
DNA (315bp) protein (105aa)
id=5048719 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45382.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsplowo2_01_scaffold_12134_7

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comp(3087..3386)
DNA (300bp) protein (100aa)
hypothetical protein n=1 Tax=candidate division OP9 bacterium OP9-77CS RepID=UPI00036C1C79
Marine sediment metagenome DNA, contig: S12H4_L04430 {ECO:0000313|EMBL:GAI75919.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
rifcsplowo2_01_scaffold_12134_8
CG_Woesearch_02, Woesearchaeota, Archaea

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3523..4083
DNA (561bp) protein (187aa)
Putative uncharacterized protein Tax=CG_Woesearch_02
Putative uncharacterized protein id=5050194 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsplowo2_01_scaffold_12134_9
unknown

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4141..4548
DNA (408bp) protein (136aa)

This feature has no annotations

rifcsplowo2_01_scaffold_12134_10

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4545..5990
DNA (1446bp) protein (482aa)
Marine sediment metagenome DNA, contig: S01H1_S07545 {ECO:0000313|EMBL:GAG13105.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
rifcsplowo2_01_scaffold_12134_11
unknown

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6154..7350
DNA (1197bp) protein (399aa)
Transporter, monovalent cation:proton antiporter-2 family protein n=1 Tax=Carnobacterium maltaromaticum LMA28 RepID=K8E279_CARML id=5103851 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Transporter, monovalent cation:proton antiporter-2 family protein n=1 Tax=Carnobacterium maltaromaticum LMA28 RepID=K8E279_CARML Tax=AR20
Transporter, monovalent cation:proton antiporter-2 family protein
rifcsplowo2_01_scaffold_12134_12
unknown

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comp(7415..8266)
DNA (852bp) protein (284aa)

This feature has no annotations

rifcsplowo2_01_scaffold_12134_13
AR11, Woesearchaeaota, DPANN, Archaea

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8549..9142
DNA (594bp) protein (198aa)
30S ribosomal protein S19; K02966 small subunit ribosomal protein S19e Tax=AR11
30S ribosomal protein S19e id=5800695 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
30S ribosomal protein S19e
rifcsplowo2_01_scaffold_12134_14

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9146..9481
DNA (336bp) protein (112aa)
Programmed cell death protein 5 {ECO:0000313|EMBL:KHO49879.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
DNA-binding protein; K06875 programmed cell death protein 5 id=5049180 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsplowo2_01_scaffold_12134_15
AR11, Woesearchaeaota, DPANN, Archaea

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10036..10566
DNA (531bp) protein (177aa)
50S ribosomal protein L31e Tax=AR11
RPL31A; 50S ribosomal protein L31; K02910 large subunit ribosomal protein L31e id=5049181 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Ribosomal protein L31e
rifcsplowo2_01_scaffold_12134_16
unknown

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comp(10571..11125)
DNA (555bp) protein (185aa)

This feature has no annotations

rifcsplowo2_01_scaffold_12134_17
Parcubacteria bacterium GW2011_GWA2_46_9, Parcubacteria, Bacteria

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11427..12407
DNA (981bp) protein (327aa)
Putative tRNA pseudouridine synthase B {ECO:0000313|EMBL:KKU47144.1}; Flags: Fragment;; TaxID=1618838 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_46_9.;"
Probable tRNA pseudouridine synthase B id=5799607 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
putative tRNA pseudouridine synthase B
rifcsplowo2_01_scaffold_12134_18

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12470..13837
DNA (1368bp) protein (456aa)
id=5045339 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Uncharacterized protein {ECO:0000313|EMBL:KHO45912.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
hypothetical protein
rifcsplowo2_01_scaffold_12134_19
Parcubacteria bacterium GW2011_GWF1_40_5, Parcubacteria, Bacteria

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13849..14268
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C8U1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KKR65098.1}; TaxID=1618955 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF1_40_5.;"
hypothetical protein
rifcsplowo2_01_scaffold_12134_20
Candidatus Magnetoovum chiemensis, Candidatus Magnetoovum, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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comp(14467..14754)
DNA (288bp) protein (96aa)
tyrA; bifunctional chorismate mutase/prephenate dehydrogenase (EC:1.3.1.12 5.4.99.-)
Putative 3-deoxy-7-phosphoheptulonate synthase n=3 Tax=root RepID=B0MX08_9BACT
Bifunctional chorismate mutase/prephenate dehydrogenase {ECO:0000313|EMBL:KJR41234.1}; TaxID=1609970 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Candidatus Magnetoovum.;" source="Ca
rifcsplowo2_01_scaffold_12134_21

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comp(14793..15080)
DNA (288bp) protein (96aa)
hypothetical protein; K09728 hypothetical protein id=5045726 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Uncharacterized protein {ECO:0000313|EMBL:KHO54393.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
hypothetical protein
rifcsplowo2_01_scaffold_12134_22
GWA2_OP11_46_7, Microgenomates, Bacteria

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comp(15097..15306)
DNA (210bp) protein (70aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000360FC43
Uncharacterized protein {ECO:0000313|EMBL:KKU44648.1}; TaxID=1618502 species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWA2_46_7.;"
hypothetical protein
rifcsplowo2_01_scaffold_12134_23
GWA2_OP11_46_7, Microgenomates, Bacteria

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comp(15311..16090)
DNA (780bp) protein (260aa)
3'-5' exoribonuclease {ECO:0000313|EMBL:KKU44649.1}; TaxID=1618502 species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWA2_46_7.;"
Ribosomal RNA-processing protein RRP42 id=5800801 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Ribosomal RNA-processing protein RRP42
rifcsplowo2_01_scaffold_12134_24
GWA2_OP11_46_7, Microgenomates, Bacteria

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comp(16092..16805)
DNA (714bp) protein (238aa)
Exosome complex exonuclease Rrp41 {ECO:0000313|EMBL:KKU44650.1}; TaxID=1618502 species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWA2_46_7.;"
Rph; exosome complex exonuclease Rrp41; K11600 exosome complex component RRP41 id=5046926 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
exosome complex exonuclease Rrp41
rifcsplowo2_01_scaffold_12134_25

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comp(16802..17527)
DNA (726bp) protein (242aa)
rpr43; exosome RNA binding protein (EC:3.1.13.-); K03679 exosome complex component RRP4 id=5046927 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Exosome complex component Rrp4 {ECO:0000256|HAMAP-Rule:MF_00623}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
putative exosome complex RNA-binding protein 1
rifcsplowo2_01_scaffold_12134_26
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(17533..18234)
DNA (702bp) protein (234aa)
Predicted exosome subunit Tax=AR11
RNA-associated protein; K14574 ribosome maturation protein SDO1 id=5046928 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
putative RNA-associated protein
rifcsplowo2_01_scaffold_12134_27
AR11, Woesearchaeaota, DPANN, Archaea

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comp(18243..18929)
DNA (687bp) protein (229aa)
proteasome endopeptidase complex, alpha subunit (EC:3.4.25.1); K03432 proteasome alpha subunit [EC:3.4.25.1] id=5045974 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Proteasome subunit alpha Tax=AR11
Proteasome subunit alpha
rifcsplowo2_01_scaffold_12134_28
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(18956..19261)
DNA (306bp) protein (102aa)
ribonuclease P protein component 2 (EC:3.1.26.5); K03537 ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5] Tax=RBG_13_Woesearchaeota_36_6_curated
Ribonuclease P protein component 2 id=5046930 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Ribonuclease P component 2
rifcsplowo2_01_scaffold_12134_29
unknown

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comp(19434..20171)
DNA (738bp) protein (246aa)

This feature has no annotations

rifcsplowo2_01_scaffold_12134_30
RIFOXYC1_FULL_RIF_OD1_03_37_11_curated, RIF-OD1-3, Parcubacteria, Bacteria

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20630..20896
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6WLW7_9EURY
hypothetical protein
coiled-coil 3..24 Tax=RIFOXYC1_FULL_RIF_OD1_03_37_11_curated
Displaying items 1-30 of 38 in total

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