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rifcsplowo2_01_scaffold_12134_25

Organism: RIFCSPLOWO2_01_FULL_Archaea_Woesearchaeota_50_16

partial RP 33 / 55 MC: 5 BSCG 6 / 51 ASCG 26 / 38
Location: comp(16802..17527)

Top 3 Functional Annotations

Value Algorithm Source
rpr43; exosome RNA binding protein (EC:3.1.13.-); K03679 exosome complex component RRP4 id=5046927 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b similarity UNIREF
DB: UNIREF100
  • Identity: 65.2
  • Coverage: 233.0
  • Bit_score: 313
  • Evalue 1.60e-82
Exosome complex component Rrp4 {ECO:0000256|HAMAP-Rule:MF_00623}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.2
  • Coverage: 233.0
  • Bit_score: 313
  • Evalue 2.30e-82
putative exosome complex RNA-binding protein 1 similarity KEGG
DB: KEGG
  • Identity: 53.7
  • Coverage: 227.0
  • Bit_score: 255
  • Evalue 1.90e-65

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Taxonomy

archaeon GW2011_AR3 → Archaea

Sequences

DNA sequence
Length: 726
ATGGGCAAATTATTGATACAAGACAAAGAGATTGTGGTGCCCGGCGAAATCATCGCCGAAGGCATGGACCATCTTCCCGGCCAGGGAACATATAGGGAAGGCGATAAGATTATTGCGGGCCGTCTGGGCCTCGCCAATGTGGAAGGGCGCGCGGTCAAGCTGATCGCGCTCTCCGGGAGATACATTCCGAAGCGGAACGACACCATCATCTGCCAGGTGATTGACGTCGGATTTTCGGGCTGGCGCGTGGAAACGAACAGCGCCTATTCGGCCATGCTCTCGGTGAAAGACGCCACGTCTGAATTCATCCGGAGGGGCGCGGATATCACGCATTATTTCAATGTGGGCGATTACCTGGTGGCCAAGATCACCAATGTAACCAGCCAGAAATTGATTGACATCTCCACCAAAGGCCCGGGCCTGAGGAAGCTGCACGGCGGCCGGATTATCCAGGTGAACTGCAATAAGGTCCCCCGCATCATCGGAAAAGCGGGATCCATGGTCAGCATGATCAAGAACGCCACCGGATGCCGCATCACCGTAGGGCAGAACGGCCTGGTATGGCTGGAAGGCGAACCAAAAAGCGAATACATTGCCATAGAAGCCATCCGGAAGATTGAGCAGGAAGCCCACCTGTCCGGGCTGACCGACCGGGTCAAGGCATTCCTGGAAGAGAAGACCGGCAAGAAGGTAGAGCCCGGCGTCGAAGAGCCGGAGCTAAGGTGA
PROTEIN sequence
Length: 242
MGKLLIQDKEIVVPGEIIAEGMDHLPGQGTYREGDKIIAGRLGLANVEGRAVKLIALSGRYIPKRNDTIICQVIDVGFSGWRVETNSAYSAMLSVKDATSEFIRRGADITHYFNVGDYLVAKITNVTSQKLIDISTKGPGLRKLHGGRIIQVNCNKVPRIIGKAGSMVSMIKNATGCRITVGQNGLVWLEGEPKSEYIAIEAIRKIEQEAHLSGLTDRVKAFLEEKTGKKVEPGVEEPELR*