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rifcsplowo2_01_scaffold_15116

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_15116_1
unknown

Not on your lists

comp(2..94)
DNA (93bp) protein (31aa)

This feature has no annotations

rifcsplowo2_01_scaffold_15116_2

Not on your lists

196..441
DNA (246bp) protein (82aa)
AbrB family transcriptional regulator id=5044100 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
AbrB family transcriptional regulator {ECO:0000313|EMBL:KHO54662.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
AbrB family transcriptional regulator
rifcsplowo2_01_scaffold_15116_3
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

435..683
DNA (249bp) protein (83aa)
hypothetical protein Tax=AR19
hypothetical protein id=5044101 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein
rifcsplowo2_01_scaffold_15116_4

Not on your lists


comp(685..882)
DNA (198bp) protein (66aa)
DNA-directed RNA polymerase subunit N n=1 Tax=uncultured organism HF70_19B12 RepID=Q2Q0G7_9ZZZZ id=5103677 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Marine sediment metagenome DNA, contig: S01H1_S00836 {ECO:0000313|EMBL:GAF92383.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
DNA-directed RNA polymerase subunit N
rifcsplowo2_01_scaffold_15116_5
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

1009..1236
DNA (228bp) protein (76aa)
id=5049699 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=CG_Pacearch_06
rifcsplowo2_01_scaffold_15116_6
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

1233..1571
DNA (339bp) protein (113aa)
transcriptional modulator of MazE/toxin MazF Tax=CG_Pacearch_06
MazF family transcriptional regulator id=5049700 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
transcriptional modulator of MazE/toxin MazF
rifcsplowo2_01_scaffold_15116_7
GWA2_Planctomycetes_40_7_curated, Planctomycetes, Bacteria

Not on your lists

1622..1927
DNA (306bp) protein (102aa)
Putative uncharacterized protein id=3297558 bin=GWA2_Planctomycetia_40_7 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GWA2_Planctomycetia_40_7 organism_group=Planctomycetes
hypothetical protein Tax=GWA2_Planctomycetes_40_7_curated
hypothetical protein
rifcsplowo2_01_scaffold_15116_8
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


comp(2211..2609)
DNA (399bp) protein (133aa)
30S ribosomal protein S9 n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000363BEDB
30S ribosomal protein S9; K02996 small subunit ribosomal protein S9 Tax=CG_Woesearch_02
30S ribosomal protein S9
rifcsplowo2_01_scaffold_15116_9
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


comp(2606..3022)
DNA (417bp) protein (139aa)
50S ribosomal protein L13 Tax=CG_Woesearch_02
LSU ribosomal protein L13P id=5799888 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
50S ribosomal protein L13P
rifcsplowo2_01_scaffold_15116_10
Methanocaldococcus villosus, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists


comp(3024..3377)
DNA (354bp) protein (118aa)
50S ribosomal protein L18e n=1 Tax=Methanocaldococcus villosus KIN24-T80 RepID=N6UUE5_9EURY
50S ribosomal protein L18e {ECO:0000256|HAMAP-Rule:MF_00329}; TaxID=1069083 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Methano
50S ribosomal protein L18ae
rifcsplowo2_01_scaffold_15116_11
R_RIF_OD1_13_53_17, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

comp(3429..4790)
DNA (1362bp) protein (454aa)
DSBA oxidoreductase family protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I9M7_CALAS
DSBA oxidoreductase Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_13_53_17_curated
DSBA oxidoreductase family protein
rifcsplowo2_01_scaffold_15116_12
unknown

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4892..5170
DNA (279bp) protein (93aa)

This feature has no annotations

rifcsplowo2_01_scaffold_15116_13
R_OP11_Curtissbacteria_38_11b, Curtissbacteria, Microgenomates, Bacteria

Not on your lists

comp(5154..5750)
DNA (597bp) protein (199aa)
Integral membrane protein n=1 Tax=uncultured bacterium RepID=K2A5X9_9BACT
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OP11_Curtissbacteria_38_11b_curated
hypothetical protein
rifcsplowo2_01_scaffold_15116_14
Candidatus Brocadia sinica, Candidatus Brocadia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(5753..6073)
DNA (321bp) protein (107aa)
UPF0060 membrane protein KSU1_C0644 n=1 Tax=planctomycete KSU-1 RepID=I3IKJ5_9PLAN
UPF0060 membrane protein BROSI_A3445 {ECO:0000256|HAMAP-Rule:MF_00010}; TaxID=1197129 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Bro
hypothetical protein
rifcsplowo2_01_scaffold_15116_15
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6070..6402)
DNA (333bp) protein (111aa)
Transcriptional modulator of MazE/toxin, MazF n=1 Tax=Clostridium botulinum BKT015925 RepID=F4A864_CLOBO
Growth inhibitor PemK {ECO:0000313|EMBL:KGM97201.1}; TaxID=1443128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum C/D str. DC5.;
transcriptional modulator of MazE/toxin MazF
rifcsplowo2_01_scaffold_15116_16
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(6387..6635)
DNA (249bp) protein (83aa)
Transcriptional regulator, AbrB family id=4203302 bin=PER_GWC2_41_7 species=Methanohalobium evestigatum genus=Methanohalobium taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
AbrB family transcriptional regulator Tax=AR4
AbrB family transcriptional regulator
rifcsplowo2_01_scaffold_15116_17
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(6808..7641)
DNA (834bp) protein (278aa)
RNA polymerase insert; K03047 DNA-directed RNA polymerase subunit D [EC:2.7.7.6] id=5049647 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
RNA polymerase insert; K03047 DNA-directed RNA polymerase subunit D [EC:2.7.7.6] Tax=AR18
DNA-directed RNA polymerase subunit D
rifcsplowo2_01_scaffold_15116_18
unknown

Not on your lists

comp(7693..8052)
DNA (360bp) protein (120aa)

This feature has no annotations

rifcsplowo2_01_scaffold_15116_19
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

8158..9306
DNA (1149bp) protein (383aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000360365F
hypothetical protein Tax=CG_Aenigma_01
rifcsplowo2_01_scaffold_15116_20

Not on your lists


comp(9312..9710)
DNA (399bp) protein (133aa)
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
rps11p; 30S ribosomal protein S11P; K02948 small subunit ribosomal protein S11 id=5051521 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
30S ribosomal protein S11
rifcsplowo2_01_scaffold_15116_21
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists


comp(9710..10333)
DNA (624bp) protein (208aa)
30S ribosomal protein S4 n=2 Tax=Methanotorris RepID=F6BD43_METIK id=5103689 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S4 Tax=RBG_13_Woesearchaeota_36_6_curated
30S ribosomal protein S4
rifcsplowo2_01_scaffold_15116_22
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


comp(10336..10881)
DNA (546bp) protein (182aa)
30S ribosomal protein S13 n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037A4ACD
rps13p; 30S ribosomal protein S13p; K02952 small subunit ribosomal protein S13 Tax=CG_Woesearch_02
30S ribosomal protein S13
Displaying 22 items

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