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rifcsplowo2_01_scaffold_2538

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_2538_1
unknown

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22..246
DNA (225bp) protein (75aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2538_2
Desulfotomaculum hydrothermale, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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391..702
DNA (312bp) protein (104aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1121428 species="Bacteria; F
DNA gyrase subunit B n=1 Tax=Desulfotomaculum hydrothermale Lam5 = DSM 18033 RepID=K8DZ63_9FIRM
DNA gyrase subunit B
rifcsplowo2_01_scaffold_2538_3
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

1073..3499
DNA (2427bp) protein (809aa)
DNA gyrase subunit B; K02470 DNA gyrase subunit B [EC:5.99.1.3] Tax=AR19
DNA gyrase subunit B n=1 Tax=Rivularia sp. PCC 7116 RepID=K9R901_9CYAN
DNA gyrase subunit B
rifcsplowo2_01_scaffold_2538_4
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

3501..3944
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036B76EC
Phosphoglycolate phosphatase Tax=AR19
rifcsplowo2_01_scaffold_2538_5
unknown

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3946..4113
DNA (168bp) protein (56aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2538_6
unknown

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4073..4240
DNA (168bp) protein (56aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2538_7
unknown

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4237..4437
DNA (201bp) protein (67aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2538_8
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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4434..6794
DNA (2361bp) protein (787aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Me
DNA gyrase subunit A (EC:5.99.1.3); K02469 DNA gyrase subunit A [EC:5.99.1.3] id=5049727 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
gyrA; DNA gyrase subunit A (EC:5.99.1.3)
rifcsplowo2_01_scaffold_2538_9
unknown

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6827..7159
DNA (333bp) protein (111aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2538_10
unknown

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comp(7169..8416)
DNA (1248bp) protein (416aa)
Translation initiation factor 2 subunit gamma n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VQJ1_METIM id=5103750 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Translation initiation factor 2 subunit gamma n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VQJ1_METIM Tax=AR20
Translation initiation factor 2 subunit gamma
rifcsplowo2_01_scaffold_2538_11
unknown

Not on your lists

8546..8959
DNA (414bp) protein (138aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2538_12

Not on your lists


comp(9227..9661)
DNA (435bp) protein (145aa)
30S ribosomal protein S6e n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BZQ0_METCG id=5103749 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S6e
30S ribosomal protein S6e {ECO:0000256|HAMAP-Rule:MF_00512, ECO:0000256|SAAS:SAAS00018829}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_2538_13
unknown

Not on your lists

comp(9713..10072)
DNA (360bp) protein (120aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2538_14
unknown

Not on your lists

comp(10112..11821)
DNA (1710bp) protein (570aa)
Probable translation initiation factor IF-2 n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GY66_METFV id=5103748 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Probable translation initiation factor IF-2 n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GY66_METFV Tax=AR20
putative translation initiation factor IF-2
rifcsplowo2_01_scaffold_2538_15
Halobacteroides halobius, Halobacteroides, Halanaerobiales, Clostridia, Firmicutes, Bacteria

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11945..13531
DNA (1587bp) protein (529aa)
RHS repeat-associated core domain protein n=1 Tax=Halobacteroides halobius (strain ATCC 35273 / DSM 5150 / MD-1) RepID=L0K520_HALHC
RHS repeat-associated core domain protein
RHS repeat-associated core domain protein {ECO:0000313|EMBL:AGB40352.1}; TaxID=748449 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halobacteroidaceae; Halobacteroides.;" source="Halobac
rifcsplowo2_01_scaffold_2538_16
unknown

Not on your lists

comp(13532..13915)
DNA (384bp) protein (128aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2538_17
unknown

Not on your lists

comp(13920..15488)
DNA (1569bp) protein (523aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2538_18
unknown

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comp(15527..16477)
DNA (951bp) protein (317aa)
SpoVT/AbrB domain protein n=12 Tax=Sulfolobus RepID=C3MR72_SULIL id=5103746 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
SpoVT/AbrB domain protein n=12 Tax=Sulfolobus RepID=C3MR72_SULIL Tax=AR20
SpoVT/AbrB protein
rifcsplowo2_01_scaffold_2538_19
unknown

Not on your lists

16575..16748
DNA (174bp) protein (58aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2538_20

Not on your lists

comp(16751..17878)
DNA (1128bp) protein (376aa)
chaperone protein DnaJ; K03686 molecular chaperone DnaJ id=5048313 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Molecular chaperone DnaJ {ECO:0000313|EMBL:KHO54031.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
chaperone protein DnaJ
rifcsplowo2_01_scaffold_2538_21
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(17904..19733)
DNA (1830bp) protein (610aa)
dnaK; chaperone DnaK; K04043 molecular chaperone DnaK Tax=CG_Woesearch_02
Chaperone protein DnaK id=5799568 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
dnaK; molecular chaperone DnaK
rifcsplowo2_01_scaffold_2538_22
unknown

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comp(19735..20706)
DNA (972bp) protein (324aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2538_23
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(20703..21230)
DNA (528bp) protein (176aa)
Protein GrpE n=1 Tax=Methanosphaera stadtmanae (strain ATCC 43021 / DSM 3091 / JCM 11832 / MCB-3) RepID=GRPE_METST
GrpE protein HSP-70 cofactor; K03687 molecular chaperone GrpE Tax=CG_Woesearch_02
molecular chaperone GrpE
rifcsplowo2_01_scaffold_2538_24
unknown

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comp(21361..21867)
DNA (507bp) protein (169aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2538_25
Rhodopirellula baltica, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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21986..25069
DNA (3084bp) protein (1028aa)
Uncharacterized protein n=1 Tax=Rhodopirellula baltica WH47 RepID=F2AZH3_RHOBT
Uncharacterized protein {ECO:0000313|EMBL:EGF24928.1}; TaxID=991778 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula bal
rifcsplowo2_01_scaffold_2538_26
unknown

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25142..25453
DNA (312bp) protein (104aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2538_27

Not on your lists

25496..25906
DNA (411bp) protein (137aa)
hypothetical protein id=5048321 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Uncharacterized protein {ECO:0000313|EMBL:KHO54039.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
hypothetical protein
rifcsplowo2_01_scaffold_2538_28
unknown

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comp(25909..26298)
DNA (390bp) protein (130aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2538_29

Not on your lists

comp(26310..26750)
DNA (441bp) protein (147aa)
Uncharacterized protein {ECO:0000313|EMBL:KKM91525.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
id=5048107 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Protein containing Nucleotide binding protein, PINc protein
rifcsplowo2_01_scaffold_2538_30

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comp(26747..26974)
DNA (228bp) protein (76aa)
hypothetical protein id=5048108 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Uncharacterized protein {ECO:0000313|EMBL:KHO45153.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
hypothetical protein
Displaying items 1-30 of 41 in total

View Taxonomy