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rifcsplowo2_01_scaffold_16404

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_16404_1
unknown

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2..424
DNA (423bp) protein (141aa)

This feature has no annotations

rifcsplowo2_01_scaffold_16404_2
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(495..755)
DNA (261bp) protein (87aa)
DinB family protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01Y08_SOLUE id=5223506 bin=16ft_combo_ws3_JS1 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
DinB family protein Tax=RBG_16_RIF_WS3X_71_46_curated
DinB family protein
rifcsplowo2_01_scaffold_16404_3
unknown

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953..1309
DNA (357bp) protein (119aa)

This feature has no annotations

rifcsplowo2_01_scaffold_16404_4
AR20, Woesearchaeaota, DPANN, Archaea

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1370..1786
DNA (417bp) protein (139aa)
hypothetical protein
id=5103248 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR20
rifcsplowo2_01_scaffold_16404_5
unknown

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1793..2263
DNA (471bp) protein (157aa)

This feature has no annotations

rifcsplowo2_01_scaffold_16404_6

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2273..4591
DNA (2319bp) protein (773aa)
Putative phosphoribosylamine-glycine ligase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMV9_NITGG
Uncharacterized protein {ECO:0000313|EMBL:KKM60657.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
phosphoribosylamine-glycine ligase
rifcsplowo2_01_scaffold_16404_7
unknown

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comp(4588..4881)
DNA (294bp) protein (98aa)

This feature has no annotations

rifcsplowo2_01_scaffold_16404_8
AR18, Woesearchaeaota, DPANN, Archaea

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4975..7830
DNA (2856bp) protein (952aa)
isoleucyl-tRNA synthetase; K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5] Tax=AR18
isoleucyl-tRNA synthetase; K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5] id=5048859 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
isoleucyl-tRNA synthetase
rifcsplowo2_01_scaffold_16404_9

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7938..8504
DNA (567bp) protein (189aa)
2-alkenal reductase; K03120 transcription initiation factor TFIID TATA-box-binding protein id=5048857 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
TATA-box-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; Box A-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; TATA sequence-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; TATA-box factor {E
TATA-box-binding protein
rifcsplowo2_01_scaffold_16404_10

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8530..10395
DNA (1866bp) protein (622aa)
MCM family protein; K10726 replicative DNA helicase Mcm [EC:3.6.4.-] id=5048855 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Replicative DNA helicase Mcm {ECO:0000313|EMBL:KHO53924.1}; EC=3.6.4.- {ECO:0000313|EMBL:KHO53924.1};; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
DNA replication initiator Cdc21/Cdc54
rifcsplowo2_01_scaffold_16404_11

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10404..11606
DNA (1203bp) protein (401aa)
DNA replication initiator (Cdc21/Cdc54) n=1 Tax=Candidatus Haloredivivus sp. G17 RepID=H0AET4_9EURY id=5103224 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA replication initiator Cdc21/Cdc54
DNA replication initiator Cdc21/Cdc54 {ECO:0000313|EMBL:AJF62505.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_16404_12
AR18, Woesearchaeaota, DPANN, Archaea

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11607..12260
DNA (654bp) protein (218aa)
id=5048854 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein
Tax=AR18
rifcsplowo2_01_scaffold_16404_13
unknown

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12292..12774
DNA (483bp) protein (161aa)

This feature has no annotations

rifcsplowo2_01_scaffold_16404_14

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comp(12771..13733)
DNA (963bp) protein (321aa)
AAA family ATPase, CDC48 subfamily n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D4W9_METSW id=5103197 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
AAA family ATPase, CDC48 subfamily
AAA family ATPase, CDC48 subfamily {ECO:0000313|EMBL:AJF62478.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
Displaying 14 items

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