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rifcsplowo2_01_scaffold_49388

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_49388_1

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1..603
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BL8 RepID=T0NEQ3_9CLOT
Ham1 family protein {ECO:0000313|EMBL:KKS38971.1}; TaxID=1618820 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_42_14.;"
Ham1 family protein
rifcsplowo2_01_scaffold_49388_2
unknown

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comp(619..858)
DNA (240bp) protein (80aa)

This feature has no annotations

rifcsplowo2_01_scaffold_49388_3
GWA2_RIF01_43_8_curated, RIF1, Bacteria

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comp(928..1599)
DNA (672bp) protein (224aa)
CTP:2, 3-di-O-geranylgeranyl-sn-glycero-1-phosphate cytidyltransferase (EC:2.7.7.-)
CTP:2, 3-di-O-geranylgeranyl-sn-glycero-1-phosphate cytidyltransferase n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12TG9_METBU
phosphatidate cytidylyltransferase Tax=GWA2_RIF01_43_8_curated
rifcsplowo2_01_scaffold_49388_4
RBG_13_WOR_2_44_8_curated, WOR-2, Bacteria

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comp(1631..2284)
DNA (654bp) protein (218aa)
Putative glycosyltransferase n=1 Tax=Caldisericum exile (strain DSM 21853 / NBRC 104410 / AZM16c01) RepID=I0GKJ2_CALEA
putative glycosyltransferase Tax=RBG_13_WOR_2_44_8_curated
putative glycosyltransferase
rifcsplowo2_01_scaffold_49388_5
AR18, Woesearchaeaota, DPANN, Archaea

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comp(2304..2960)
DNA (657bp) protein (219aa)
DNA topoisomerase VI subunit A (EC:5.99.1.3); K03166 DNA topoisomerase VI subunit A [EC:5.99.1.3] id=5048844 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
DNA topoisomerase VI subunit A (EC:5.99.1.3); K03166 DNA topoisomerase VI subunit A [EC:5.99.1.3] Tax=AR18
DNA topoisomerase ATP-hydrolyzing
rifcsplowo2_01_scaffold_49388_6

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comp(3020..3322)
DNA (303bp) protein (101aa)
Type 2 DNA topoisomerase 6 subunit A {ECO:0000256|HAMAP-Rule:MF_00132}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00132};; Type II DNA topoisomerase VI subunit A {ECO:0000256|HAMAP-Rule:MF_00132}; TaxID=
DNA topoisomerase VI subunit A (EC:5.99.1.3); K03166 DNA topoisomerase VI subunit A [EC:5.99.1.3] id=5048844 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
DNA topoisomerase ATP-hydrolyzing
rifcsplowo2_01_scaffold_49388_7

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comp(3303..4892)
DNA (1590bp) protein (530aa)
Type 2 DNA topoisomerase 6 subunit B {ECO:0000256|HAMAP-Rule:MF_00322}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00322};; Type II DNA topoisomerase VI subunit B {ECO:0000256|HAMAP-Rule:MF_00322}; TaxID=
DNA topoisomerase VI, subunit B n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PEY4_9BACT id=5103233 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA topoisomerase VI, subunit B
rifcsplowo2_01_scaffold_49388_8
unknown

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comp(4928..5092)
DNA (165bp) protein (55aa)

This feature has no annotations

rifcsplowo2_01_scaffold_49388_9
unknown

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comp(5108..5605)
DNA (498bp) protein (166aa)

This feature has no annotations

rifcsplowo2_01_scaffold_49388_10
CG_Micra_02, Micraarchaeota, Archaea

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5694..6251
DNA (558bp) protein (186aa)
LemA family protein; K03744 LemA protein Tax=CG_Micra_02
LemA family protein; K03744 LemA protein id=5048305 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein
rifcsplowo2_01_scaffold_49388_11
unknown

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6260..6586
DNA (327bp) protein (109aa)

This feature has no annotations

rifcsplowo2_01_scaffold_49388_12
unknown

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comp(6583..7446)
DNA (864bp) protein (288aa)
Putative uncharacterized protein n=1 Tax=Arcobacter nitrofigilis (strain ATCC 33309 / DSM 7299 / LMG 7604 / NCTC 12251 / CI) RepID=D5V072_ARCNC id=5103881 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Putative uncharacterized protein n=1 Tax=Arcobacter nitrofigilis (strain ATCC 33309 / DSM 7299 / LMG 7604 / NCTC 12251 / CI) RepID=D5V072_ARCNC Tax=AR20
hypothetical protein
rifcsplowo2_01_scaffold_49388_13

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7521..8000
DNA (480bp) protein (160aa)
seg id=5800818 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF62148.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
rifcsplowo2_01_scaffold_49388_14
unknown

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8031..8828
DNA (798bp) protein (266aa)
Protease HtpX homolog n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AZ57_RUBXD id=5103215 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Protease HtpX homolog n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AZ57_RUBXD Tax=AR20
Protease HtpX-like protein
rifcsplowo2_01_scaffold_49388_15
Leptotrichia sp. oral taxon 215, Leptotrichia, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

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8779..8970
DNA (192bp) protein (64aa)
Protease HtpX homolog {ECO:0000256|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_00188};; TaxID=1321779 species="Bacteria; Fusobacteria; Fusobacteriales; Leptotrichiaceae; Leptotrichia.
peptidase M48 Ste24p; K03799 heat shock protein HtpX [EC:3.4.24.-]
protease n=1 Tax=Fusobacterium russii RepID=UPI0003A4EB04
rifcsplowo2_01_scaffold_49388_16
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8973..10010)
DNA (1038bp) protein (346aa)
HflC protein; K04087 membrane protease subunit HflC [EC:3.4.-.-] Tax=RBG_13_Deltaproteobacteria_61_14_curated
hypothetical protein id=8267323 bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
HflC protein
rifcsplowo2_01_scaffold_49388_17
Treponema denticola, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(10007..11143)
DNA (1137bp) protein (379aa)
membrane protein n=1 Tax=Omnitrophica bacterium SCGC AAA257-O07 RepID=UPI0003B3C03F
HflK protein {ECO:0000313|EMBL:EMB46271.1}; TaxID=999426 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema denticola AL-2.;"
hflK protein
rifcsplowo2_01_scaffold_49388_18
unknown

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comp(11256..11405)
DNA (150bp) protein (50aa)

This feature has no annotations

rifcsplowo2_01_scaffold_49388_19
AR11, Woesearchaeaota, DPANN, Archaea

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comp(11402..11944)
DNA (543bp) protein (181aa)
KH domain protein; K06961 ribosomal RNA assembly protein Tax=AR11
KH domain protein; K06961 ribosomal RNA assembly protein id=5048469 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsplowo2_01_scaffold_49388_20

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comp(11947..12306)
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000363D148
Translation initiation factor 1A {ECO:0000256|HAMAP-Rule:MF_00216}; Short=aIF-1A {ECO:0000256|HAMAP-Rule:MF_00216};; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
Translation initiation factor 1A
rifcsplowo2_01_scaffold_49388_21
GWE2_OD1_38_254, Falkowbacteria, Parcubacteria, Bacteria

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comp(12346..12612)
DNA (267bp) protein (89aa)
Uncharacterized protein id=1987391 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
Uncharacterized protein {ECO:0000313|EMBL:KKQ64945.1}; TaxID=1618639 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Falkowbacteria) bacterium GW2011_GWE2_38_254.;"
hypothetical protein
Displaying 21 items

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