ggKbase home page

rifcsplowo2_01_scaffold_2020_4

Organism: RIFCSPLOWO2_01_FULL_Archaea_Woesearchaeota_29_14

near complete RP 37 / 55 MC: 7 BSCG 6 / 51 ASCG 33 / 38 MC: 5
Location: 2724..3269

Top 3 Functional Annotations

Value Algorithm Source
Putative transcriptional regulator n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A4T9_NITMS similarity UNIREF
DB: UNIREF100
  • Identity: 29.5
  • Coverage: 88.0
  • Bit_score: 56
  • Evalue 4.60e-05
Putative transcriptional regulator {ECO:0000313|EMBL:AIF03890.1}; TaxID=1456043 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_16_C11.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.0
  • Coverage: 61.0
  • Bit_score: 57
  • Evalue 1.70e-05
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 29.5
  • Coverage: 88.0
  • Bit_score: 56
  • Evalue 1.50e-05

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

uncultured marine thaumarchaeote KM3_16_C11 → Thaumarchaeota → Archaea

Sequences

DNA sequence
Length: 546
GTGTTAAATAATGATATAAAGGCTAGAATTCTTGAGTTTATTAAAAAGAATGAAAATTTATGTTCTGGAACTGATATCTCTAAACAACTTAATATTAATAGAATAACCTTAGCAAAATATTTATCTGTTATGGAAAGTGAAGGAATAATTGATTATCATGGAATTGGAATGGCTAAAAGCTGGTATTTGCAAAAAAATAATTTGATTAATAATTTTCATAAAGAGAATGGAAGACAATTAAGGGAAATATTAGATTTAGTTGGAGAAGGGGTTTGTATAACTGATAATGATAATAAAATAATCTGGATGAATAAGATTGCTAAAAATAGTTATTGTAAGAAAGAGAATTATGTTGGCGGGAATTGCTGTGAGGTATTTAATTGTGGAGAACATTGCAGCAAAGGAAATATCAAAAATATAATGATTGAGAAAGGAGTTTATAAATTTGAATGTGAAGTTGAAGATGGATCAAAAATAAAAAATATAGCAAGTCCATTAATGGATAATAATGAAGTTGTTGGAAGTATAAGGATAATGATAAGTTAA
PROTEIN sequence
Length: 182
VLNNDIKARILEFIKKNENLCSGTDISKQLNINRITLAKYLSVMESEGIIDYHGIGMAKSWYLQKNNLINNFHKENGRQLREILDLVGEGVCITDNDNKIIWMNKIAKNSYCKKENYVGGNCCEVFNCGEHCSKGNIKNIMIEKGVYKFECEVEDGSKIKNIASPLMDNNEVVGSIRIMIS*