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rifcsplowo2_01_scaffold_2020

Search features with annotation key words

Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_2020_1
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(1..168)
DNA (168bp) protein (56aa)
triosephosphate isomerase; K01803 triosephosphate isomerase (TIM) [EC:5.3.1.1] Tax=RBG_13_Woesearchaeota_36_6_curated
rifcsplowo2_01_scaffold_2020_2
RIFOXYA2_FULL_Elusimicrobia_40_6_curated, Elusimicrobia, Bacteria

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256..1731
DNA (1476bp) protein (492aa)
hypothetical protein Tax=RIFOXYA2_FULL_Elusimicrobia_40_6_curated
YD repeat-containing protein id=4699325 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Desulfococcus oleovorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
RHS repeat-associated core domain protein
rifcsplowo2_01_scaffold_2020_3
unknown

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comp(1745..2242)
DNA (498bp) protein (166aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2020_4

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2724..3269
DNA (546bp) protein (182aa)
Putative transcriptional regulator n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A4T9_NITMS
Putative transcriptional regulator {ECO:0000313|EMBL:AIF03890.1}; TaxID=1456043 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_16_C11.;"
transcriptional regulator
rifcsplowo2_01_scaffold_2020_5
ACD4, Gracilibacteria, Bacteria

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comp(3266..3637)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2FW39_9BACT
seg 46..63 Tax=ACD4
rifcsplowo2_01_scaffold_2020_6
AR17, Woesearchaeaota, DPANN, Archaea

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3688..4269
DNA (582bp) protein (194aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037A6A62
Conserved hypothetical membrane protein, peptidase family M50 Tax=AR17
Conserved hypothetical membrane protein, peptidase family M50
rifcsplowo2_01_scaffold_2020_7
unknown

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comp(4285..4758)
DNA (474bp) protein (158aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2020_8
RIFOXYC1_FULL_RIF_OD1_03_37_11_curated, RIF-OD1-3, Parcubacteria, Bacteria

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comp(4783..6051)
DNA (1269bp) protein (423aa)
glutamate dehydrogenase; K00260 glutamate dehydrogenase [EC:1.4.1.2] Tax=RIFOXYC1_FULL_RIF_OD1_03_37_11_curated
Glutamate dehydrogenase n=1 Tax=Korarchaeum cryptofilum (strain OPF8) RepID=B1L7M0_KORCO
glutamate dehydrogenase/leucine dehydrogenase
rifcsplowo2_01_scaffold_2020_9
RLO_OD1_Magasanikbacteria_43_12, Magasanikbacteria, Parcubacteria, Bacteria

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6144..7667
DNA (1524bp) protein (508aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_OD1_Magasanikbacteria_43_12_curated
YD repeat-containing protein id=4699325 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Desulfococcus oleovorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
RHS repeat-associated core domain protein
rifcsplowo2_01_scaffold_2020_10
RBG_19FT_COMBO_Euryarchaeota_56_21_curated, Euryarchaeota, Archaea

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comp(7697..8410)
DNA (714bp) protein (238aa)
alanyl-tRNA synthetase (EC:6.1.1.7)
Alanyl-tRNA synthetase n=1 Tax=Picrophilus torridus (strain ATCC 700027 / DSM 9790 / JCM 10055 / NBRC 100828) RepID=Q6L247_PICTO
threonyl/alanyl tRNA synthetase, SAD Tax=RBG_19FT_COMBO_Euryarchaeota_56_21_curated
rifcsplowo2_01_scaffold_2020_11
AR9, Woesearchaeaota, DPANN, Archaea

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8461..8691
DNA (231bp) protein (77aa)
hypothetical protein
id=5241279 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR9
rifcsplowo2_01_scaffold_2020_12

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8696..8908
DNA (213bp) protein (71aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO50108.1}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
hypothetical protein
Protein of unknown function DUF2283 id=5241280 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsplowo2_01_scaffold_2020_13
AR9, Woesearchaeaota, DPANN, Archaea

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comp(8912..9205)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BTE4_METCG id=5103719 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein Tax=AR9
hypothetical protein
rifcsplowo2_01_scaffold_2020_14
unknown

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comp(9355..9861)
DNA (507bp) protein (169aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2020_15
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(9902..10306)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XLZ8_METZD
automatic annotation Tax=CG_Woesearch_02
hypothetical protein
rifcsplowo2_01_scaffold_2020_16
GWE2_CPR3_35_7, CPR3, Bacteria

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comp(10314..10970)
DNA (657bp) protein (219aa)
nucH; thermonuclease NucH (EC:3.1.31.1)
Nuclease-like protein id=2024140 bin=GWE2_CPR3_35_7 species=ACD22 genus=ACD22 taxon_order=ACD22 taxon_class=ACD22 phylum=WWE3 tax=GWE2_CPR3_35_7 organism_group=CPR3 organism_desc=Good
Nuclease-like protein {ECO:0000313|EMBL:KKP85628.1}; TaxID=1618349 species="Bacteria; candidate division CPR3.;" source="candidate division CPR3 bacterium GW2011_GWE2_35_7.;"
rifcsplowo2_01_scaffold_2020_17
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists

comp(10967..11728)
DNA (762bp) protein (254aa)
uppP; UDP-diphosphatase (EC:3.6.1.27); K06153 undecaprenyl-diphosphatase [EC:3.6.1.27] Tax=CG_Pacearch_04
UDP pyrophosphate phosphatase n=1 Tax=Marinimicrobia bacterium JGI 0000039-D08 RepID=UPI0003AABDAB
undecaprenyl-diphosphatase
rifcsplowo2_01_scaffold_2020_18
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

11914..12201
DNA (288bp) protein (96aa)
hypothetical protein; K09728 hypothetical protein id=5045726 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein; K09728 hypothetical protein Tax=AR18
hypothetical protein
rifcsplowo2_01_scaffold_2020_19
unknown

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12260..13198
DNA (939bp) protein (313aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2020_20
unknown

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13241..14527
DNA (1287bp) protein (429aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2020_21
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

14566..15243
DNA (678bp) protein (226aa)
pyrH; uridylate kinase; K09903 uridylate kinase [EC:2.7.4.22] Tax=AR19
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037E64D8
pyrH; uridylate kinase
rifcsplowo2_01_scaffold_2020_22
unknown

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15264..15776
DNA (513bp) protein (171aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2020_23
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

15801..16277
DNA (477bp) protein (159aa)
adenylate kinase (EC:2.7.4.3) Tax=RBG_13_Woesearchaeota_36_6_curated
adenylate kinase (EC:2.7.4.3) id=5045728 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Adenylate kinase
rifcsplowo2_01_scaffold_2020_24

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16300..18075
DNA (1776bp) protein (592aa)
GTP pyrophosphokinase n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=Q3A9Z8_CARHZ id=5102885 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
GTP pyrophosphokinase
GTP pyrophosphokinase {ECO:0000313|EMBL:AJF62166.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_2020_25

Not on your lists

comp(18072..18782)
DNA (711bp) protein (237aa)
Tritrans,polycis-undecaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.89 {ECO:0000256|HAMAP-Rule:MF_01139};; Undecaprenyl diphosphate synt
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003669815
Tritrans,polycis-undecaprenyl-diphosphate synthase, geranylgeranyl-diphosphate specific
rifcsplowo2_01_scaffold_2020_26
CG_Moran_02, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(18829..19779)
DNA (951bp) protein (317aa)
hydroxymethylbutenyl pyrophosphate reductase (EC:1.17.1.2); K03527 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [EC:1.17.1.2] Tax=CG_Moran_02
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Neisseria flavescens SK114 RepID=C5TNK7_NEIFL
4-hydroxy-3-methylbut-2-enyl diphosphate reductase
rifcsplowo2_01_scaffold_2020_27
unknown

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19832..20341
DNA (510bp) protein (170aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037F7A10
Ribonuclease P protein component 3 n=1 Tax=Thermococcus sibiricus (strain MM 739 / DSM 12597) RepID=C6A3Q0_THESM Tax=AR20
Ribonuclease P protein component 3
rifcsplowo2_01_scaffold_2020_28

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comp(20344..20673)
DNA (330bp) protein (110aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035FEC2B
Marine sediment metagenome DNA, contig: S06H3_S00355 {ECO:0000313|EMBL:GAI24318.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
rifcsplowo2_01_scaffold_2020_29

Not on your lists

20767..21054
DNA (288bp) protein (96aa)
MMGP4 n=1 Tax=uncultured organism RepID=G9HQ37_9ZZZZ
MMGP4 {ECO:0000313|EMBL:AEO37468.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
rifcsplowo2_01_scaffold_2020_30
unknown

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comp(21068..21418)
DNA (351bp) protein (117aa)

This feature has no annotations

Displaying items 1-30 of 63 in total

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