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rifcsplowo2_01_scaffold_5660

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_5660_1
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

1..168
DNA (168bp) protein (56aa)
hypothetical protein; K07163 Tax=CG_Pacearch_02
rifcsplowo2_01_scaffold_5660_2
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists


193..1455
DNA (1263bp) protein (421aa)
tRNA CCA-pyrophosphorylase; K07558 tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72] Tax=CG_Pacearch_02
tRNA nucleotidyltransferase (CCA-adding enzyme) id=5799810 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
tRNA nucleotidyltransferase CCA-adding enzyme
rifcsplowo2_01_scaffold_5660_3
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(1456..2253)
DNA (798bp) protein (266aa)
hypothetical protein Tax=CG_Pacearch_06
hypothetical protein id=5042335 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsplowo2_01_scaffold_5660_4
unknown

Not on your lists

2364..2558
DNA (195bp) protein (65aa)

This feature has no annotations

rifcsplowo2_01_scaffold_5660_5
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(2735..3661)
DNA (927bp) protein (309aa)
hypothetical protein
hypothetical protein Tax=CG_Pacearch_06
hypothetical protein id=5044144 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rifcsplowo2_01_scaffold_5660_6
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(3663..5543)
DNA (1881bp) protein (627aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036EAF14
metal-dependent RNase; K07041 Tax=CG_Pacearch_03
metal-dependent RNase
rifcsplowo2_01_scaffold_5660_7
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

comp(5566..6231)
DNA (666bp) protein (222aa)
proteasome endopeptidase complex subunit beta (EC:3.4.25.1); K03433 proteasome beta subunit [EC:3.4.25.1] Tax=CG_Pacearch_02
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003791C71
Proteasome subunit beta
rifcsplowo2_01_scaffold_5660_8
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(6310..8409)
DNA (2100bp) protein (700aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036A0D51
smc domain protein; K03546 exonuclease SbcC Tax=CG_Pacearch_03
SMC protein
rifcsplowo2_01_scaffold_5660_9
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

comp(8399..9553)
DNA (1155bp) protein (385aa)
metallophosphoesterase Tax=CG_Pacearch_02
DNA double-strand break repair protein Mre11 id=5799870 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Metallophosphoesterase
rifcsplowo2_01_scaffold_5660_10
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(9726..10250)
DNA (525bp) protein (175aa)
Tax=CG_Pacearch_03
rifcsplowo2_01_scaffold_5660_11
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(10225..10752)
DNA (528bp) protein (176aa)
Marine sediment metagenome DNA, contig: S01H1_S22588 Tax=CG_Pacearch_06
rifcsplowo2_01_scaffold_5660_12
unknown

Not on your lists

comp(11109..11267)
DNA (159bp) protein (53aa)

This feature has no annotations

rifcsplowo2_01_scaffold_5660_13
GWC2_OD1_35_8, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists


comp(11312..12979)
DNA (1668bp) protein (556aa)
argS; arginyl-tRNA synthetase (EC:6.1.1.19)
arginyl-tRNA synthetase n=1 Tax=Clostridium tyrobutyricum RepID=UPI0003780191
Arginyl-tRNA ligase {ECO:0000313|EMBL:KKP88241.1}; TaxID=1618752 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWC2_35_8.;"
rifcsplowo2_01_scaffold_5660_14
unknown

Not on your lists

comp(13014..13436)
DNA (423bp) protein (141aa)

This feature has no annotations

rifcsplowo2_01_scaffold_5660_15
GWC2_OD1_35_8, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

13633..16263
DNA (2631bp) protein (877aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP88239.1}; TaxID=1618752 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWC2_35_8.;"
rifcsplowo2_01_scaffold_5660_16
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

16511..16969
DNA (459bp) protein (153aa)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E5R9_METEZ
FKBP-type peptidylprolyl isomerase Tax=CG_Pacearch_02
FKBP-type peptidylprolyl isomerase
rifcsplowo2_01_scaffold_5660_17
AR1, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(16971..18596)
DNA (1626bp) protein (542aa)
hypothetical protein Tax=AR1
RecJ-like exonuclease (DnaJ-type Zn finger protein) id=3795705 bin=GWF2_Lentisphaerae_38_69 species=Desulfobacterium autotrophicum genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_38_69 organism_group=Lentisphaerae organism_desc=a349
RecJ-like exonuclease (DnaJ-type Zn finger protein)
Displaying 17 items

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