ggKbase home page

rifcsplowo2_01_scaffold_39864

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_39864_1
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists


3..887
DNA (885bp) protein (295aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036E5234
translation initiation factor 2 subunit gamma (aeif-2g); K03242 translation initiation factor 2 subunit 3 Tax=CG_Pacearch_06
translation initiation factor 2 subunit gamma
rifcsplowo2_01_scaffold_39864_2
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(884..1522)
DNA (639bp) protein (213aa)
Putative uncharacterized protein id=1857426 bin=GWD2_Nitrospirae-related_57_8 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
hypothetical protein Tax=GWC2_Nitrospirae_57_13_curated
SNARE associated Golgi protein-related protein
rifcsplowo2_01_scaffold_39864_3
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

comp(1519..2610)
DNA (1092bp) protein (364aa)
DNA integrity scanning protein DisA n=1 Tax=Clostridium sp. CAG:1219 RepID=R5SSK2_9CLOT
DNA integrity scanning protein DisA; K07067 DNA integrity scanning protein Tax=CG_Pacearch_02
DNA integrity scanning protein DisA
rifcsplowo2_01_scaffold_39864_4
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists


3042..3635
DNA (594bp) protein (198aa)
DNA-directed RNA polymerase (EC:2.7.7.6); K03049 DNA-directed RNA polymerase subunit E' [EC:2.7.7.6] Tax=CG_Pacearch_06
DNA-directed RNA polymerase subunit E n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6VV26_9EURY
DNA-directed RNA polymerase subunit E
rifcsplowo2_01_scaffold_39864_5
unknown

Not on your lists

3632..3976
DNA (345bp) protein (115aa)

This feature has no annotations

rifcsplowo2_01_scaffold_39864_6
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

3977..4162
DNA (186bp) protein (62aa)
rpoE2; DNA-directed RNA polymerase subunit E'' (EC:2.7.7.6); K03050 DNA-directed RNA polymerase subunit E" [EC:2.7.7.6] Tax=CG_Pacearch_03
DNA-directed RNA polymerase subunit E'' (EC:2.7.7.6)
Transcription elongation factor Spt4 n=1 Tax=Thermosphaera aggregans (strain DSM 11486 / M11TL) RepID=D5U3D4_THEAM
rifcsplowo2_01_scaffold_39864_7
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

4165..4452
DNA (288bp) protein (96aa)
30S ribosomal protein S24e n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6WJW2_9EURY
30S ribosomal protein S24e Tax=CG_Pacearch_06
rifcsplowo2_01_scaffold_39864_8
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

4452..4688
DNA (237bp) protein (79aa)
30S ribosomal protein S27ae; K02977 small subunit ribosomal protein S27Ae Tax=CG_Pacearch_02
30S ribosomal protein S27ae
30S ribosomal protein S27ae; K02977 small subunit ribosomal protein S27Ae id=5049718 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rifcsplowo2_01_scaffold_39864_9
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(4702..5112)
DNA (411bp) protein (137aa)
id=5046914 Tax=RBG_16_Euryarchaeota_41_19_curated
id=5046914 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsplowo2_01_scaffold_39864_10
GWB1_OP11_41_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(5115..5639)
DNA (525bp) protein (175aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS13599.1}; TaxID=1618429 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWB1_41_5.;"
id=5046915 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsplowo2_01_scaffold_39864_11

Not on your lists

comp(5736..5927)
DNA (192bp) protein (64aa)
id=5045781 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46394.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsplowo2_01_scaffold_39864_12
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(5905..6168)
DNA (264bp) protein (88aa)
id=5045781 Tax=RBG_13_Pacearchaeota_36_9_curated
id=5045781 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsplowo2_01_scaffold_39864_13
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(6152..6772)
DNA (621bp) protein (207aa)
id=5045782 Tax=RBG_13_Pacearchaeota_36_9_curated
id=5045782 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsplowo2_01_scaffold_39864_14
unknown

Not on your lists

comp(7003..7131)
DNA (129bp) protein (43aa)

This feature has no annotations

rifcsplowo2_01_scaffold_39864_15
unknown

Not on your lists

comp(7595..7663)
DNA (69bp) protein (23aa)

This feature has no annotations

Displaying 15 items

View Taxonomy