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rifcsplowo2_01_scaffold_6121

Search features with annotation key words

Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_6121_1
GWB1_OP11_39_10b, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(3..737)
DNA (735bp) protein (245aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ93768.1}; TaxID=1618573 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWB1_39_10b.;"
transmembrane_regions 7..29 id=43575 bin=ACD38 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
rifcsplowo2_01_scaffold_6121_2
unknown

Not on your lists

comp(861..1727)
DNA (867bp) protein (289aa)

This feature has no annotations

rifcsplowo2_01_scaffold_6121_3

Not on your lists

comp(1724..2470)
DNA (747bp) protein (249aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KHO51237.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
Putative uncharacterized protein id=5042325 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsplowo2_01_scaffold_6121_4
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(2472..3818)
DNA (1347bp) protein (449aa)
preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY Tax=AR9
SecY; preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY id=5041782 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Protein translocase subunit SecY
rifcsplowo2_01_scaffold_6121_5

Not on your lists


comp(3831..4217)
DNA (387bp) protein (129aa)
50S ribosomal protein L15P n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GZE1_METFV id=5103274 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L15P
rifcsplowo2_01_scaffold_6121_6

Not on your lists


comp(4218..4568)
DNA (351bp) protein (117aa)
Large subunit ribosomal protein L30 {ECO:0000313|EMBL:KHO51234.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
50S ribosomal protein L30P id=5800042 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
50S ribosomal protein L30P
rifcsplowo2_01_scaffold_6121_7
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


comp(4558..5331)
DNA (774bp) protein (258aa)
rps5p; 30S ribosomal protein S5P; K02988 small subunit ribosomal protein S5 Tax=CG_Woesearch_02
rps5p; 30S ribosomal protein S5P; K02988 small subunit ribosomal protein S5 id=5042321 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
30S ribosomal protein S5
rifcsplowo2_01_scaffold_6121_8

Not on your lists


comp(5331..5831)
DNA (501bp) protein (167aa)
50S ribosomal protein L18P n=2 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IBI0_ACIB4
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337, ECO:0000256|SAAS:SAAS00243986}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L18
rifcsplowo2_01_scaffold_6121_9

Not on your lists

comp(5818..6270)
DNA (453bp) protein (151aa)
50S ribosomal protein L19e {ECO:0000256|HAMAP-Rule:MF_01475}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
ribosomal protein L19e; K02885 large subunit ribosomal protein L19e id=5041777 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
50S ribosomal protein L19e
rifcsplowo2_01_scaffold_6121_10
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(6267..6821)
DNA (555bp) protein (185aa)
50S ribosomal protein L32e; K02912 large subunit ribosomal protein L32e id=5041776 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
50S ribosomal protein L32e; K02912 large subunit ribosomal protein L32e Tax=AR4
50S ribosomal protein L32
rifcsplowo2_01_scaffold_6121_11

Not on your lists


comp(6818..7369)
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035F6817
50S ribosomal protein L6P {ECO:0000313|EMBL:AJS12291.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L6
rifcsplowo2_01_scaffold_6121_12
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(7360..7740)
DNA (381bp) protein (127aa)
30S ribosomal protein S8; K02994 small subunit ribosomal protein S8 Tax=AR9
30S ribosomal protein S8P; K02994 small subunit ribosomal protein S8 id=5042316 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rps8p; 30S ribosomal protein S8
rifcsplowo2_01_scaffold_6121_13

Not on your lists


comp(7974..8489)
DNA (516bp) protein (172aa)
50S ribosomal protein L5 n=2 Tax=Methanotorris RepID=F6BD87_METIK id=5103265 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L5P {ECO:0000313|EMBL:AJS12103.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L5
rifcsplowo2_01_scaffold_6121_14
Methanocella conradii, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(8486..9160)
DNA (675bp) protein (225aa)
30S ribosomal protein S4e n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8IAJ2_METCZ
rps4e; 30S ribosomal protein S4
30S ribosomal protein S4e {ECO:0000256|HAMAP-Rule:MF_00485}; TaxID=1041930 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella con
rifcsplowo2_01_scaffold_6121_15
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


comp(9157..9567)
DNA (411bp) protein (137aa)
rpl24p; 50S ribosomal protein L24P; K02895 large subunit ribosomal protein L24 Tax=CG_Woesearch_02
50S ribosomal protein L24; K02895 large subunit ribosomal protein L24 id=5042312 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
50S ribosomal protein L24
rifcsplowo2_01_scaffold_6121_16

Not on your lists


comp(9528..9929)
DNA (402bp) protein (134aa)
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rpl14p; 50S ribosomal protein L14P; K02874 large subunit ribosomal protein L14 id=5042311 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
50S ribosomal protein L14P
rifcsplowo2_01_scaffold_6121_17

Not on your lists


comp(9926..10228)
DNA (303bp) protein (101aa)
30S ribosomal protein S17P n=2 Tax=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) RepID=RS17_PYRHO
30S ribosomal protein S17P {ECO:0000256|HAMAP-Rule:MF_01345}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
30S ribosomal protein S17P
rifcsplowo2_01_scaffold_6121_18
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(10225..10530)
DNA (306bp) protein (102aa)
translation initiation factor 1 (eif-1/sui1); K03113 translation initiation factor 1 Tax=CG_Woesearch_02
translation initiation factor 1 (eIF-1/SUI1); K03113 translation initiation factor 1 id=5042308 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
translation initiation factor SUI1
rifcsplowo2_01_scaffold_6121_19

Not on your lists


comp(10523..10717)
DNA (195bp) protein (65aa)
50S ribosomal protein L29P n=1 Tax=Methanothermococcus okinawensis (strain DSM 14208 / JCM 11175 / IH1) RepID=F8AM64_METOI
Uncharacterized protein {ECO:0000313|EMBL:AIF15166.1}; TaxID=1456245 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_69_H10.;"
50S ribosomal protein L29; K02904 large subunit ribosomal protein L29
rifcsplowo2_01_scaffold_6121_20

Not on your lists


comp(10707..11486)
DNA (780bp) protein (260aa)
30S ribosomal protein S3 n=1 Tax=uncultured organism RepID=U3GQK3_9ZZZZ
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
30S ribosomal protein S3
rifcsplowo2_01_scaffold_6121_21

Not on your lists


comp(11483..11926)
DNA (444bp) protein (148aa)
50S ribosomal protein L22 {ECO:0000256|RuleBase:RU004007}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L22; K02890 large subunit ribosomal protein L22 id=5042305 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
50S ribosomal protein L22
rifcsplowo2_01_scaffold_6121_22

Not on your lists


comp(11945..12325)
DNA (381bp) protein (127aa)
rps19p; 30S ribosomal protein S19; K02965 small subunit ribosomal protein S19 id=5042304 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
30S ribosomal protein S19P {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
SSU ribosomal protein S19P
rifcsplowo2_01_scaffold_6121_23
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


comp(12325..13023)
DNA (699bp) protein (233aa)
LSU ribosomal protein l2p; K02886 large subunit ribosomal protein L2 Tax=CG_Woesearch_02
50S ribosomal protein L2; K02886 large subunit ribosomal protein L2 id=5042303 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
50S ribosomal protein L8e (L2p)
rifcsplowo2_01_scaffold_6121_24
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


comp(13025..13279)
DNA (255bp) protein (85aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003624D48
rplW; 50S ribosomal protein L23; K02892 large subunit ribosomal protein L23 Tax=CG_Woesearch_02
50S ribosomal protein L23P
rifcsplowo2_01_scaffold_6121_25

Not on your lists


comp(13286..14092)
DNA (807bp) protein (269aa)
50S ribosomal protein L4P {ECO:0000313|EMBL:AJS12015.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rpl4lp; 50S ribosomal protein L4P; K02930 large subunit ribosomal protein L4e id=5041760 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
50S ribosomal protein L4
rifcsplowo2_01_scaffold_6121_26

Not on your lists


comp(14089..15036)
DNA (948bp) protein (316aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037EA6E5
50S ribosomal protein L3 {ECO:0000256|SAAS:SAAS00023038}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L3
rifcsplowo2_01_scaffold_6121_27
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(15431..15898)
DNA (468bp) protein (156aa)
id=5048391 Tax=RBG_13_Woesearchaeota_36_6_curated
rifcsplowo2_01_scaffold_6121_28
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(15891..16358)
DNA (468bp) protein (156aa)
hypothetical protein
Uncharacterized protein Tax=AR9
id=5103666 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rifcsplowo2_01_scaffold_6121_29
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(16312..16821)
DNA (510bp) protein (170aa)
id=5800197 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=AR9
rifcsplowo2_01_scaffold_6121_30

Not on your lists

comp(16989..17303)
DNA (315bp) protein (105aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035F928F
Nascent polypeptide-associated complex protein {ECO:0000256|HAMAP-Rule:MF_00814}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
alpha-NAC-related protein
Displaying items 1-30 of 59 in total

View Taxonomy