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rifcsplowo2_01_scaffold_28203

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_28203_1
Nitrosomonas eutropha, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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354..1721
DNA (1368bp) protein (456aa)
Aldehyde dehydrogenase n=1 Tax=Nitrosomonas eutropha (strain C91) RepID=Q0AI60_NITEC
aldehyde dehydrogenase
Aldehyde dehydrogenase {ECO:0000313|EMBL:ABI58972.1}; TaxID=335283 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas eutr
rifcsplowo2_01_scaffold_28203_2
R_RIF_OD1_11_46_22b, RIF-OD1-11, Parcubacteria, Bacteria

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1733..3181
DNA (1449bp) protein (483aa)
phosphoenolpyruvate synthase; K01007 pyruvate, water dikinase [EC:2.7.9.2] Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_11_46_22b_curated
Pyruvate, water dikinase n=1 Tax=uncultured bacterium RepID=K2EBL6_9BACT
phosphoenolpyruvate synthase
rifcsplowo2_01_scaffold_28203_3
unknown

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3178..3420
DNA (243bp) protein (81aa)

This feature has no annotations

rifcsplowo2_01_scaffold_28203_4
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

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3417..5066
DNA (1650bp) protein (550aa)
acetolactate synthase; K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] Tax=GWC2_Nitrospirae_57_13_curated
Similar to acetolactate synthase id=4736580 bin=GWC2_Nitrospirae_57_13 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
acetolactate synthase
rifcsplowo2_01_scaffold_28203_5
AR18, Woesearchaeaota, DPANN, Archaea

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comp(5188..5772)
DNA (585bp) protein (195aa)
Uncharacterized protein id=5048881 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Uncharacterized protein Tax=AR18
rifcsplowo2_01_scaffold_28203_6
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(5769..6353)
DNA (585bp) protein (195aa)
id=5048880 Tax=CG_Woesearch_01
id=5048880 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rifcsplowo2_01_scaffold_28203_7
unknown

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comp(6566..7057)
DNA (492bp) protein (164aa)

This feature has no annotations

rifcsplowo2_01_scaffold_28203_8
unknown

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comp(7057..7374)
DNA (318bp) protein (106aa)

This feature has no annotations

rifcsplowo2_01_scaffold_28203_9
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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7569..8000
DNA (432bp) protein (144aa)
Response regulator receiver modulated diguanylate cyclase n=1 Tax=Desulfovibrio sp. X2 RepID=S7TVG9_9DELT
two component transcriptional regulator, winged helix family; K07658 two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacter
response receiver sensor histidine kinase
rifcsplowo2_01_scaffold_28203_10
RBG_19FT_COMBO_Aminicenantes_58_17_curated, Aminicenantes, Bacteria

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8097..9014
DNA (918bp) protein (306aa)
dihydrolipoyllysine-residue acetyltransferase (EC:2.3.1.12); K00627 pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12] id=24413757 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=Methanomicrobia phylum=Euryarchaeota tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
dihydrolipoyllysine-residue acetyltransferase (EC:2.3.1.12); K00627 pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12] Tax=RBG_19FT_COMBO_Aminicenantes_58_17_curate
dihydrolipoyllysine-residue acetyltransferase (EC:2.3.1.12)
rifcsplowo2_01_scaffold_28203_11

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9019..9285
DNA (267bp) protein (89aa)
hypothetical protein; K00627 pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12] id=5048732 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45395.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
rifcsplowo2_01_scaffold_28203_12

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comp(9282..9707)
DNA (426bp) protein (142aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Putative toxin VapC {ECO:0000256|HAMAP-Rule:MF_
Ribonuclease VapC n=1 Tax=Thermococcus sp. AM4 RepID=B7R4R9_9EURY
PIN domain-containing protein
rifcsplowo2_01_scaffold_28203_13

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comp(9955..10677)
DNA (723bp) protein (241aa)
Transcriptional regulator TrmB {ECO:0000313|EMBL:KHO51360.1}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
transcriptional regulator TrmB
transcriptional regulator TrmB id=5241641 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsplowo2_01_scaffold_28203_14
unknown

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10906..11403
DNA (498bp) protein (166aa)

This feature has no annotations

rifcsplowo2_01_scaffold_28203_15
Desulfomonile tiedjei, Desulfomonile, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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11562..12275
DNA (714bp) protein (238aa)
Octanoyltransferase {ECO:0000256|SAAS:SAAS00218471}; EC=2.3.1.- {ECO:0000256|SAAS:SAAS00277418};; EC=2.3.1.181 {ECO:0000256|SAAS:SAAS00218470};; TaxID=706587 species="Bacteria; Proteobacteria; Deltapr
Lipoate-protein ligase B/lipoate synthase n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C1N8_DESTA
lipoate-protein ligase B/lipoate synthase
rifcsplowo2_01_scaffold_28203_16
unknown

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12485..13417
DNA (933bp) protein (311aa)

This feature has no annotations

rifcsplowo2_01_scaffold_28203_17

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13653..13976
DNA (324bp) protein (108aa)
hypothetical protein
id=5042269 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46767.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
Displaying 17 items

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