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rifcsplowo2_01_scaffold_28550

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_28550_1
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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33..740
DNA (708bp) protein (236aa)
hypoxanthine phosphoribosyltransferase (EC:2.4.2.8); K00760 hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] Tax=CG_Paludi_01
Hypoxanthine phosphoribosyltransferase n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8T9K7_MESCW
hypothetical protein
rifcsplowo2_01_scaffold_28550_2
CG_Woesearch_03, Woesearchaeota, Archaea

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comp(741..1724)
DNA (984bp) protein (328aa)
Transcriptional regulator; K03719 Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein Tax=CG_Woesearch_03
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
Transcriptional regulator; K03719 Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein id=5241813 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsplowo2_01_scaffold_28550_3
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(1734..2114)
DNA (381bp) protein (127aa)
hypothetical protein Tax=CG_Pacearch_03
hypothetical protein id=5050138 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsplowo2_01_scaffold_28550_4
CG_Pacearch_03, Pacearchaeota, Archaea

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comp(2111..2368)
DNA (258bp) protein (86aa)
Putative uncharacterized protein n=1 Tax=Methanococcus maripaludis RepID=G0H4T0_METMI id=5103799 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
hypothetical protein Tax=CG_Pacearch_03
rifcsplowo2_01_scaffold_28550_5
R_OD1_Falkowbacteria_39_33, Falkowbacteria, Parcubacteria, Bacteria

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2571..3884
DNA (1314bp) protein (438aa)
asparagine synthase (EC:6.3.5.4); K01953 asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] Tax=RIFCSPLOWO2_01_FULL_OD1_Falkowbacteria_39_33_curated
rifcsplowo2_01_scaffold_28550_6
unknown

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3931..4518
DNA (588bp) protein (196aa)

This feature has no annotations

rifcsplowo2_01_scaffold_28550_7
unknown

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4515..4700
DNA (186bp) protein (62aa)

This feature has no annotations

rifcsplowo2_01_scaffold_28550_8
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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4858..5571
DNA (714bp) protein (238aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon GZfos33H6 RepID=Q649Z2_9ARCH
Putative transcriptional regulator {ECO:0000313|EMBL:KCZ70971.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanop
hypothetical protein
rifcsplowo2_01_scaffold_28550_9
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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5558..6325
DNA (768bp) protein (256aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon GZfos33H6 RepID=Q649Z3_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KCZ70970.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;"
hypothetical protein
rifcsplowo2_01_scaffold_28550_10

Not on your lists

6759..7355
DNA (597bp) protein (199aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02005}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02005};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02005}; TaxID=1579378 species="Archaea.;" source=
Valine--tRNA ligase n=1 Tax=uncultured archaeon RepID=D1J9A9_9ARCH id=5103313 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Suspect SCG annotation. See neighboring gene [rifcsplowo2_01_scaffold_28550_11].
Valine-tRNA ligase
rifcsplowo2_01_scaffold_28550_11
Methanocella conradii, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

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7333..9117
DNA (1785bp) protein (595aa)
valS; valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02005}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02005};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02005}; TaxID=1041930 species="Archaea; Euryarcha
Valine--tRNA ligase n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I5V6_METCZ
rifcsplowo2_01_scaffold_28550_12
unknown

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comp(9044..9577)
DNA (534bp) protein (178aa)

This feature has no annotations

rifcsplowo2_01_scaffold_28550_13
unknown

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10214..10765
DNA (552bp) protein (184aa)

This feature has no annotations

rifcsplowo2_01_scaffold_28550_14
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(10804..11031)
DNA (228bp) protein (76aa)
Putative uncharacterized protein id=5046867 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Putative uncharacterized protein Tax=AR18
rifcsplowo2_01_scaffold_28550_15

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comp(11028..11312)
DNA (285bp) protein (95aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO54779.1}; TaxID=1579377 species="Archaea.;" source="archaeon GW2011_AR19.;"
rifcsplowo2_01_scaffold_28550_16
AR19, Pacearchaeaota, DPANN, Archaea

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comp(11329..12702)
DNA (1374bp) protein (458aa)
cysteinyl-tRNA synthetase (EC:6.1.1.16); K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] Tax=AR19
Cysteine--tRNA ligase n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LJW2_THEBM
cysteinyl-tRNA synthetase
rifcsplowo2_01_scaffold_28550_17
unknown

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comp(12909..13169)
DNA (261bp) protein (87aa)

This feature has no annotations

rifcsplowo2_01_scaffold_28550_18

Not on your lists

comp(13183..13509)
DNA (327bp) protein (109aa)
TOPRIM domain-containing protein id=5050201 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
TOPRIM protein {ECO:0000313|EMBL:KHO44982.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsplowo2_01_scaffold_28550_19
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

13562..14116
DNA (555bp) protein (185aa)
hypothetical protein; K00992 [EC:2.7.7.-] Tax=AR11
hypothetical protein
Putative uncharacterized protein id=5800080 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsplowo2_01_scaffold_28550_20
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

14113..14982
DNA (870bp) protein (290aa)
hypothetical protein; K00992 [EC:2.7.7.-] Tax=AR11
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037B8391
hypothetical protein
rifcsplowo2_01_scaffold_28550_21
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(15215..15829)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=T0ZJE8_9ZZZZ
Uncharacterized protein Tax=CG_Woesearch_01
rifcsplowo2_01_scaffold_28550_22

Not on your lists

comp(15813..16397)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2ELM9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KHO50175.1}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
Displaying 22 items

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