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rifcsplowo2_01_scaffold_10072

Search features with annotation key words

Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_10072_1
unknown

Not on your lists

311..496
DNA (186bp) protein (62aa)

This feature has no annotations

rifcsplowo2_01_scaffold_10072_2
unknown

Not on your lists

444..641
DNA (198bp) protein (66aa)

This feature has no annotations

rifcsplowo2_01_scaffold_10072_3
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(1272..1895)
DNA (624bp) protein (208aa)
no description id=5043981 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
no description Tax=AR4
rifcsplowo2_01_scaffold_10072_4
unknown

Not on your lists

2020..2166
DNA (147bp) protein (49aa)

This feature has no annotations

rifcsplowo2_01_scaffold_10072_5
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

comp(2203..3597)
DNA (1395bp) protein (465aa)
transmembrane_regions Tax=CG_Woesearch_03
seg id=5800566 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsplowo2_01_scaffold_10072_6
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3765..3944
DNA (180bp) protein (60aa)
rne; K08300 ribonuclease E [EC:3.1.26.12]
Uncharacterized protein n=1 Tax=Microbacterium sp. TS-1 RepID=U2XBS3_9MICO
Uncharacterized protein {ECO:0000313|EMBL:GAD35271.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
rifcsplowo2_01_scaffold_10072_7
R_OD1_Campbellbacteria_34_15, Campbellbacteria, Parcubacteria, Bacteria

Not on your lists

3986..4393
DNA (408bp) protein (136aa)
Histidine triad (HIT) protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=D6SSB8_9DELT
histidine triad (HIT) protein; K02503 Hit-like protein involved in cell-cycle regulation Tax=RIFCSPLOWO2_01_FULL_OD1_Campbellbacteria_34_15_curated
histidine triad (HIT) protein
rifcsplowo2_01_scaffold_10072_8
Parcubacteria bacterium GW2011_GWA2_46_7, Parcubacteria, Bacteria

Not on your lists

4660..5739
DNA (1080bp) protein (360aa)
Ig family protein {ECO:0000313|EMBL:KKU43483.1}; TaxID=1618837 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_46_7.;"
Ig family protein id=5046016 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsplowo2_01_scaffold_10072_9
Methanolobus tindarius, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

5753..8038
DNA (2286bp) protein (762aa)
UPI0003D1A86A related cluster n=1 Tax=unknown RepID=UPI0003D1A86A
Putative Ig domain-containing protein {ECO:0000313|EMBL:ETA68609.1}; TaxID=1090322 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanolobus.;" source="Meth
subtilisin-like serine protease
rifcsplowo2_01_scaffold_10072_10

Not on your lists

8065..9543
DNA (1479bp) protein (493aa)
ski2-type helicase; K03726 helicase [EC:3.6.4.-] id=5045823 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Helicase {ECO:0000313|EMBL:KHO46436.1}; EC=3.6.4.- {ECO:0000313|EMBL:KHO46436.1};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
ski2-like helicase
rifcsplowo2_01_scaffold_10072_11
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(9566..10042)
DNA (477bp) protein (159aa)
HEPN id=5041756 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR9
rifcsplowo2_01_scaffold_10072_12
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(10035..10619)
DNA (585bp) protein (195aa)
Nucleotidyl transferase domain id=5041755 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR9
rifcsplowo2_01_scaffold_10072_13
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(10797..11438)
DNA (642bp) protein (214aa)
deoxyribonuclease V (EC:3.1.21.7); K05982 deoxyribonuclease V [EC:3.1.21.7] Tax=RBG_13_Woesearchaeota_36_6_curated
endonuclease V (deoxyinosine 3'endonuclease)(deoxyribonuclease V) (DNase V) (EC:3.1.21.7)
hypothetical protein n=1 Tax=Pseudomonas luteola RepID=UPI00031660E5
rifcsplowo2_01_scaffold_10072_14
unknown

Not on your lists

11576..12229
DNA (654bp) protein (218aa)

This feature has no annotations

rifcsplowo2_01_scaffold_10072_15
unknown

Not on your lists

comp(12232..13731)
DNA (1500bp) protein (500aa)

This feature has no annotations

rifcsplowo2_01_scaffold_10072_16
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

13814..14479
DNA (666bp) protein (222aa)
UPI0002893CB3 related cluster id=5044041 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
UPI0002893CB3 related cluster Tax=AR4
hypothetical protein
rifcsplowo2_01_scaffold_10072_17

Not on your lists

14476..15582
DNA (1107bp) protein (369aa)
group 1 glycosyl transferase id=5044042 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Group 1 glycosyl transferase {ECO:0000313|EMBL:KHO46885.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
group 1 glycosyl transferase
rifcsplowo2_01_scaffold_10072_18
Peregrinibacteria bacterium GW2011_GWA2_43_8, Peregrinibacteria, Bacteria

Not on your lists

comp(15574..16317)
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1ZEE3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKT20150.1}; TaxID=1619056 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_43_8.;"
hypothetical protein
rifcsplowo2_01_scaffold_10072_19
AR1, Pacearchaeaota, DPANN, Archaea

Not on your lists

16412..16762
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Actinobaculum massiliae ACS-171-V-Col2 RepID=K9EYG6_9ACTO
Ferric uptake regulator family protein Tax=AR1
Fur family ferric uptake regulator
rifcsplowo2_01_scaffold_10072_20

Not on your lists

comp(17071..18276)
DNA (1206bp) protein (402aa)
DNA/RNA helicase, superfamily II n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7U6F9_9EURY id=5103581 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DEAD-box RNA helicase {ECO:0000313|EMBL:CEG12737.1}; TaxID=717931 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="groundwater metagenome.;"
DNA/RNA helicase, superfamily II
rifcsplowo2_01_scaffold_10072_21

Not on your lists

19146..20648
DNA (1503bp) protein (501aa)
ATP dependent helicase, lhr family; K03724 ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-] id=5049176 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
ATP-dependent helicase Lhr and Lhr-like protein helicase {ECO:0000313|EMBL:KHO45167.1}; EC=3.6.4.- {ECO:0000313|EMBL:KHO45167.1};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
DEAD/H associated protein
rifcsplowo2_01_scaffold_10072_22

Not on your lists

20626..21726
DNA (1101bp) protein (367aa)
DEAD/H associated domain protein n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D7W5_METSW id=5103576 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DEAD/H associated protein
DEAD/H associated protein {ECO:0000313|EMBL:AJF62857.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_10072_23
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

21944..22264
DNA (321bp) protein (107aa)
hypothetical protein
id=5048677 Tax=CG_Woesearch_01
id=5048677 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsplowo2_01_scaffold_10072_24
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(22236..22841)
DNA (606bp) protein (202aa)
50S ribosomal protein L15e; K02877 large subunit ribosomal protein L15e Tax=RBG_13_Woesearchaeota_36_6_curated
50S ribosomal protein L15e; K02877 large subunit ribosomal protein L15e id=5047112 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
50S ribosomal protein L15e
rifcsplowo2_01_scaffold_10072_25
GWD2_OD1_38_42, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

22938..23351
DNA (414bp) protein (138aa)
Fibronectin, type III domain protein id=1889077 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
Fibronectin, type III domain protein {ECO:0000313|EMBL:KKQ72488.1}; TaxID=1618637 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Falkowbacteria) bacterium GW2011_GWD2_38_42.;"
rifcsplowo2_01_scaffold_10072_26
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(23411..23914)
DNA (504bp) protein (168aa)
hypothetical protein Tax=AR18
hypothetical protein id=5048336 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein
rifcsplowo2_01_scaffold_10072_27
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(24074..24658)
DNA (585bp) protein (195aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035C97DE
hypothetical protein Tax=AR18
hypothetical protein
rifcsplowo2_01_scaffold_10072_28
Magnetospira sp. QH-2, Magnetospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24749..25003)
DNA (255bp) protein (85aa)
hypothetical protein n=1 Tax=Methylophilus RepID=UPI0003811F7F
conserved membrane protein of unknown function
Uncharacterized protein {ECO:0000313|EMBL:CCQ72118.1}; TaxID=1288970 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospira.;" source="Magnetospira s
rifcsplowo2_01_scaffold_10072_29
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(25000..25269)
DNA (270bp) protein (90aa)
regulatory protein MarR Tax=CG_Woesearch_02
regulatory protein MarR id=5043998 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsplowo2_01_scaffold_10072_30
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

25387..26604
DNA (1218bp) protein (406aa)
DNA repair helicase rad3 Tax=CG_Woesearch_02
ATP dependent helicase id=5799755 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
ATP dependent helicase
Displaying items 1-30 of 59 in total

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