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rifcsplowo2_01_scaffold_5801

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
rifcsplowo2_01_scaffold_5801_1
unknown

Not on your lists

1..147
-----------------
DNA (147bp)
protein (49aa)

This feature has no annotations

rifcsplowo2_01_scaffold_5801_2
unknown

Not on your lists

152..880
-----------------
DNA (729bp)
protein (243aa)

This feature has no annotations

rifcsplowo2_01_scaffold_5801_3

Not on your lists

comp(789..2081)
-----------------
DNA (1293bp)
protein (431aa)
glutamyl-tRNA(Gln) amidotransferase subunit D; K09482 glutamyl-tRNA(Gln) amidotransferase subunit D [EC:6.3.5.7] id=5051049 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Glutamyl-tRNA(Gln) amidotransferase subunit D
rifcsplowo2_01_scaffold_5801_4
RHI_OP11_45_10, Microgenomates, Bacteria

Not on your lists

comp(2138..2848)
-----------------
DNA (711bp)
protein (237aa)
cytochrome c biogenesis transmembrane protein id=5044143 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
cytochrome c biogenesis transmembrane protein
rifcsplowo2_01_scaffold_5801_5

Not on your lists

comp(2838..3674)
-----------------
DNA (837bp)
protein (279aa)
hypothetical protein id=14425135 bin=bin1_lowGC species=Gloeobacter violaceus genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=bin1_lowGC organism_group=Unknown_CP
vitamin K epoxide reductase
rifcsplowo2_01_scaffold_5801_6
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(3674..4081)
-----------------
DNA (408bp)
protein (136aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-J21 RepID=UPI00037CF883
hypothetical protein
rifcsplowo2_01_scaffold_5801_7

Not on your lists

comp(4142..4540)
-----------------
DNA (399bp)
protein (133aa)
DoxX family protein n=1 Tax=uncultured bacterium RepID=K2GBH7_9BACT
LuxR family transcriptional regulator
rifcsplowo2_01_scaffold_5801_8
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(4551..5123)
-----------------
DNA (573bp)
protein (191aa)
LemA family protein n=1 Tax=Thermobrachium celere DSM 8682 RepID=R7RQQ9_9CLOT
LemA family protein
rifcsplowo2_01_scaffold_5801_9
GWA2_Elusimicrobia_62_23_curated, Elusimicrobia, Bacteria

Not on your lists

comp(5616..7568)
-----------------
DNA (1953bp)
protein (651aa)
Serine/threonine protein kinase with Chase2 sensor id=1719515 bin=GWB2_Elusimicrobium_63_22 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Elusimicrobium_63_22 organism_group=Elusimicrobia organism_desc=Good -
serine/threonine protein kinase
rifcsplowo2_01_scaffold_5801_10
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

7692..7985
-----------------
DNA (294bp)
protein (98aa)
hypothetical protein id=5042183 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
hypothetical protein
rifcsplowo2_01_scaffold_5801_11

Not on your lists

7976..8314
-----------------
DNA (339bp)
protein (113aa)
hypothetical protein id=5042184 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
hypothetical protein
rifcsplowo2_01_scaffold_5801_12
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(8319..9023)
-----------------
DNA (705bp)
protein (235aa)
atm:ANT_12970 mutL; DNA mismatch repair protein MutL; K03572 DNA mismatch repair protein MutL id=1246768 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
DNA mismatch repair protein MutL
rifcsplowo2_01_scaffold_5801_13
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(8981..9991)
-----------------
DNA (1011bp)
protein (337aa)
hypothetical protein n=1 Tax=Orenia marismortui RepID=UPI0003816C02
DNA mismatch repair protein MutL
rifcsplowo2_01_scaffold_5801_14
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(9988..12429)
-----------------
DNA (2442bp)
protein (814aa)
DNA mismatch repair protein MutS n=7 Tax=Clostridium thermocellum RepID=MUTS_CLOTH
DNA mismatch repair protein MutS
rifcsplowo2_01_scaffold_5801_15
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

comp(12644..13351)
-----------------
DNA (708bp)
protein (236aa)
Uncharacterized protein AF_1947 n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=Y1947_ARCFU
Putative hemolysin
rifcsplowo2_01_scaffold_5801_16
unknown

Not on your lists

comp(13348..14307)
-----------------
DNA (960bp)
protein (320aa)

This feature has no annotations

rifcsplowo2_01_scaffold_5801_17
unknown

Not on your lists

14489..14737
-----------------
DNA (249bp)
protein (83aa)

This feature has no annotations

rifcsplowo2_01_scaffold_5801_18
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(14734..16695)
-----------------
DNA (1962bp)
protein (654aa)
id=5045888 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsplowo2_01_scaffold_5801_19

Not on your lists

comp(16701..18137)
-----------------
DNA (1437bp)
protein (479aa)
Protein with oligosaccharyl transferase domain n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12VK5_METBU
hypothetical protein
rifcsplowo2_01_scaffold_5801_20
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

18664..19377
-----------------
DNA (714bp)
protein (238aa)
Glycosyl transferase family 2 n=1 Tax=Gloeocapsa sp. PCC 7428 RepID=K9XJE8_9CHRO
glycosyl transferase family 2
rifcsplowo2_01_scaffold_5801_21
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

19374..20462
-----------------
DNA (1089bp)
protein (363aa)
UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14)
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D8A0_METSW
rifcsplowo2_01_scaffold_5801_22

Not on your lists

20443..20982
-----------------
DNA (540bp)
protein (180aa)
transferase hexapeptide repeat containing protein id=5045906 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
transferase hexapeptide repeat containing protein
rifcsplowo2_01_scaffold_5801_23
GWA2_OP11_nov_36_23, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

20979..22061
-----------------
DNA (1083bp)
protein (361aa)
mpd:MCP_0764 putative aminotransferase id=129212 bin=ACD79 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=ACD79 organism_group=Chlamydiae organism_desc=Novel, branching deeply from Chlamydiae
putative pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis
rifcsplowo2_01_scaffold_5801_24
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

22045..22539
-----------------
DNA (495bp)
protein (165aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q469H9_METBF
MutT protein
rifcsplowo2_01_scaffold_5801_25
Geobacter sp. M21, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22553..23890
-----------------
DNA (1338bp)
protein (446aa)
MATE efflux family protein n=1 Tax=Geobacter sp. (strain M21) RepID=C6E9E9_GEOSM
MATE efflux family protein
rifcsplowo2_01_scaffold_5801_26
unknown

Not on your lists

comp(24059..24583)
-----------------
DNA (525bp)
protein (175aa)
Putative uncharacterized protein n=1 Tax=Methanoplanus limicola DSM 2279 RepID=H1YZ68_9EURY id=5103413 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
rifcsplowo2_01_scaffold_5801_27
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(24590..25180)
-----------------
DNA (591bp)
protein (197aa)
hypothetical protein
id=5103412 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rifcsplowo2_01_scaffold_5801_28
R_OD1_Falkowbacteria_39_17, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(25558..25797)
-----------------
DNA (240bp)
protein (80aa)
rifcsplowo2_01_scaffold_5801_29
R_OD1_Falkowbacteria_39_17, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(25790..26449)
-----------------
DNA (660bp)
protein (220aa)
rifcsplowo2_01_scaffold_5801_30
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

27011..27241
-----------------
DNA (231bp)
protein (77aa)
Putative uncharacterized protein id=5047315 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Displaying items 1-30 of 46 in total

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