ggKbase home page

rifcsplowo2_01_scaffold_34421

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_34421_1
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

1..843
DNA (843bp) protein (281aa)
Tax=AR17
rifcsplowo2_01_scaffold_34421_2
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

891..1715
DNA (825bp) protein (275aa)
gur:Gura_3402 prophage antirepressor id=126615 bin=ACD79 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=ACD79 organism_group=Chlamydiae organism_desc=Novel, branching deeply from Chlamydiae
prophage antirepressor
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
rifcsplowo2_01_scaffold_34421_3
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

1719..3305
DNA (1587bp) protein (529aa)
lysK; lysyl-tRNA synthetase (EC:6.1.1.6); K04566 lysyl-tRNA synthetase, class I [EC:6.1.1.6] id=5046890 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
lysK; lysyl-tRNA synthetase (EC:6.1.1.6); K04566 lysyl-tRNA synthetase, class I [EC:6.1.1.6] Tax=AR18
lysyl-tRNA synthetase (EC:6.1.1.6)
rifcsplowo2_01_scaffold_34421_4

Not on your lists

3382..5247
DNA (1866bp) protein (622aa)
sodium/hydrogen exchanger id=5043591 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Sodium/hydrogen exchanger {ECO:0000313|EMBL:KHO46567.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
Transporter, CPA2 family
rifcsplowo2_01_scaffold_34421_5
Mycobacterium tuberculosis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5244..5723)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Pristionchus pacificus RepID=H3F193_PRIPA
PE-PGRS family protein PE_PGRS53 {ECO:0000313|EMBL:KCN18465.1}; TaxID=1423445 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex.
hypothetical protein
rifcsplowo2_01_scaffold_34421_6
unknown

Not on your lists

comp(6104..6343)
DNA (240bp) protein (80aa)

This feature has no annotations

rifcsplowo2_01_scaffold_34421_7

Not on your lists

6498..7691
DNA (1194bp) protein (398aa)
Uncharacterized protein id=5799713 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF61044.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
hypothetical protein
rifcsplowo2_01_scaffold_34421_8
unknown

Not on your lists

comp(7597..7971)
DNA (375bp) protein (125aa)

This feature has no annotations

rifcsplowo2_01_scaffold_34421_9
unknown

Not on your lists

8024..8134
DNA (111bp) protein (37aa)

This feature has no annotations

rifcsplowo2_01_scaffold_34421_10

Not on your lists

8316..8579
DNA (264bp) protein (88aa)
fdiV; ferredoxin [2Fe-2S] 4 id=5044573 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Ferredoxin [2Fe-2S] 4 {ECO:0000313|EMBL:KHO46307.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
fdxC; ferredoxin-4
rifcsplowo2_01_scaffold_34421_11
unknown

Not on your lists

8593..9075
DNA (483bp) protein (161aa)

This feature has no annotations

rifcsplowo2_01_scaffold_34421_12
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

9100..9675
DNA (576bp) protein (192aa)
peroxiredoxin; K03386 peroxiredoxin (alkyl hydroperoxide reductase subunit C) [EC:1.11.1.15] Tax=AR9
prx-1; peroxiredoxin (EC:1.11.1.15); K03386 peroxiredoxin (alkyl hydroperoxide reductase subunit C) [EC:1.11.1.15] id=5227199 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
prx-1; peroxiredoxin (EC:1.11.1.15)
rifcsplowo2_01_scaffold_34421_13

Not on your lists

9737..10330
DNA (594bp) protein (198aa)
Superoxide dismutase, Fe-Mn family {ECO:0000313|EMBL:KHO53436.1}; EC=1.15.1.1 {ECO:0000313|EMBL:KHO53436.1};; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
Superoxide dismutase (EC:1.15.1.1)
superoxide dismutase n=1 Tax=unclassified candidate division EM 19 RepID=UPI0003B535FC
rifcsplowo2_01_scaffold_34421_14
unknown

Not on your lists

10402..11499
DNA (1098bp) protein (366aa)

This feature has no annotations

Displaying 14 items

View Taxonomy