ggKbase home page

rifcsplowo2_01_scaffold_24656

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_24656_1
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

155..1219
DNA (1065bp) protein (355aa)
pyruvate dehydrogenase E1 component subunit alpha (EC:1.2.4.4 1.2.4.1)
Pyruvate dehydrogenase E1 component subunit alpha id=5799638 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Pyruvate dehydrogenase E1 component subunit alpha Tax=AR15
rifcsplowo2_01_scaffold_24656_2
unknown

Not on your lists

1222..1542
DNA (321bp) protein (107aa)

This feature has no annotations

rifcsplowo2_01_scaffold_24656_3
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

1579..2553
DNA (975bp) protein (325aa)
Transketolase central region id=5799639 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Transketolase central region Tax=AR15
transketolase, central region
rifcsplowo2_01_scaffold_24656_4
unknown

Not on your lists

2656..2907
DNA (252bp) protein (84aa)

This feature has no annotations

rifcsplowo2_01_scaffold_24656_5

Not on your lists

2909..4168
DNA (1260bp) protein (420aa)
hypothetical protein; K00627 pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12] id=5048732 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
dihydrolipoyllysine-residue acetyltransferase (EC:2.3.1.12)
Uncharacterized protein {ECO:0000313|EMBL:KHO45395.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsplowo2_01_scaffold_24656_6
unknown

Not on your lists

comp(4169..4552)
DNA (384bp) protein (128aa)

This feature has no annotations

rifcsplowo2_01_scaffold_24656_7
unknown

Not on your lists

4683..4979
DNA (297bp) protein (99aa)

This feature has no annotations

rifcsplowo2_01_scaffold_24656_8

Not on your lists

comp(5044..5844)
DNA (801bp) protein (267aa)
Lipoate-protein ligase A, C-terminal id=5799643 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF60974.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
putative biotin/lipoate A/B protein ligase
rifcsplowo2_01_scaffold_24656_9
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

5886..7052
DNA (1167bp) protein (389aa)
Glucose/sorbosone dehydrogenase n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KVQ5_METHD
glucose/sorbosone dehydrogenase
Glucose/sorbosone dehydrogenase {ECO:0000313|EMBL:AGB49522.1}; Flags: Precursor;; TaxID=867904 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanomethylovo
rifcsplowo2_01_scaffold_24656_10
unknown

Not on your lists

7104..7676
DNA (573bp) protein (191aa)

This feature has no annotations

rifcsplowo2_01_scaffold_24656_11

Not on your lists

comp(7744..7887)
DNA (144bp) protein (48aa)
Uncharacterized protein n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I717_METCZ id=5103534 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KKM83950.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
rifcsplowo2_01_scaffold_24656_12
unknown

Not on your lists

comp(7910..8089)
DNA (180bp) protein (60aa)

This feature has no annotations

Displaying 12 items

View Taxonomy