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rifcsplowo2_01_scaffold_3029

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_3029_1
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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2..190
DNA (189bp) protein (63aa)
Tax=RBG_13_Woesearchaeota_36_6_curated
rifcsplowo2_01_scaffold_3029_2

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comp(489..3632)
DNA (3144bp) protein (1048aa)
Isoleucine-tRNA ligase {ECO:0000313|EMBL:AJF61934.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
Isoleucine--tRNA ligase id=5800603 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
isoleucyl-tRNA synthetase
rifcsplowo2_01_scaffold_3029_3
unknown

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comp(3685..4083)
DNA (399bp) protein (133aa)

This feature has no annotations

rifcsplowo2_01_scaffold_3029_4
Altiarchaeum hamiconexum, Altiarchaeum, Altiarchaeales, Euryarchaeota, Archaea

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comp(4112..7879)
DNA (3768bp) protein (1256aa)
pol; DNA-directed DNA polymerase, B family (pol) (EC:2.7.7.7); K02319 DNA polymerase I [EC:2.7.7.7] Tax=Altiarchaeum hamiconexum
DNA polymerase n=1 Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QF87_9EURY rbh
DNA polymerase
rifcsplowo2_01_scaffold_3029_5

Not on your lists

7973..10372
DNA (2400bp) protein (800aa)
Metallophosphoesterase id=5044242 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Metallophosphoesterase {ECO:0000313|EMBL:KHO46523.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
hypothetical protein
rifcsplowo2_01_scaffold_3029_6
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

10545..10946
DNA (402bp) protein (134aa)
FAD synthase Tax=AR11
FAD synthetase
cytidyltransferase-related domain protein; K14656 FAD synthetase id=5240942 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsplowo2_01_scaffold_3029_7
R_RIF_OD1_12_48_27, RIF-OD1-12, Parcubacteria, Bacteria

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10943..11344
DNA (402bp) protein (134aa)
DSBA oxidoreductase Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_12_48_27_curated
DSBA oxidoreductase id=3544170 bin=GWA1_ZB2_49_26 species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
rifcsplowo2_01_scaffold_3029_8

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11349..11771
DNA (423bp) protein (141aa)
DoxX family protein n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SIV8_9BACT id=5103609 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DoxX family protein
DoxX family protein {ECO:0000313|EMBL:AJF62890.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_3029_9
unknown

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11777..12052
DNA (276bp) protein (92aa)

This feature has no annotations

rifcsplowo2_01_scaffold_3029_10
unknown

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comp(12064..12804)
DNA (741bp) protein (247aa)
Metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein n=1 Tax=Caldisphaera lagunensis (strain DSM 15908 / JCM 11604 / IC-154) RepID=L0ACG9_CALLD id=5103442 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein n=1 Tax=Caldisphaera lagunensis (strain DSM 15908 / JCM 11604 / IC-154) RepID=L0ACG9_CALLD Tax=AR20
Metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein
rifcsplowo2_01_scaffold_3029_11
unknown

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13142..13606
DNA (465bp) protein (155aa)

This feature has no annotations

rifcsplowo2_01_scaffold_3029_12
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

13642..14145
DNA (504bp) protein (168aa)
nicotinamide-nucleotide adenylyltransferase (EC:2.7.7.1); K00952 nicotinamide-nucleotide adenylyltransferase [EC:2.7.7.1] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
nicotinamide-nucleotide adenylyltransferase; K00952 nicotinamide-nucleotide adenylyltransferase [EC:2.7.7.1] id=5096382 bin=PER_GWF2_38_29 species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=PER_GWF2_38_29 organism_group=PER (Peregrinibacteria)
nicotinamide-nucleotide adenylyltransferase (EC:2.7.7.1)
rifcsplowo2_01_scaffold_3029_13
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(14138..14320)
DNA (183bp) protein (61aa)
CopG family transcriptional regulator Tax=AR6
rifcsplowo2_01_scaffold_3029_14
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(14362..15465)
DNA (1104bp) protein (368aa)
Chaperone protein DnaJ Tax=AR11
Chaperone protein DnaJ id=5800476 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
dnaJ; molecular chaperone DnaJ
rifcsplowo2_01_scaffold_3029_15
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(15471..15989)
DNA (519bp) protein (173aa)
hypothetical protein Tax=AR11
Uncharacterised protein family UPF0153 id=5799564 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsplowo2_01_scaffold_3029_16
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16294..16770)
DNA (477bp) protein (159aa)
Metal dependent phosphohydrolase n=1 Tax=Desulfotomaculum carboxydivorans (strain DSM 14880 / VKM B-2319 / CO-1-SRB) RepID=F6B6P2_DESCC
metal-dependent phosphohydrolase Tax=RBG_16_Deltaproteobacteria_47_11_curated
metal dependent phosphohydrolase
rifcsplowo2_01_scaffold_3029_17

Not on your lists

comp(16785..17228)
DNA (444bp) protein (148aa)
hypothetical protein
id=3832830 bin=PER_GWC2_41_7 species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
Uncharacterized protein {ECO:0000313|EMBL:KHO47175.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
rifcsplowo2_01_scaffold_3029_18
CG_Pacearch_01, Pacearchaeota, Archaea

Not on your lists

comp(17225..17770)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W213_UNCMA id=5103857 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
id=3832835 Tax=CG_Pacearch_01
hypothetical protein
rifcsplowo2_01_scaffold_3029_19
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(17900..19795)
DNA (1896bp) protein (632aa)
dnaK; chaperone DnaK; K04043 molecular chaperone DnaK Tax=CG_Woesearch_02
Chaperone protein DnaK id=5799568 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
dnaK; molecular chaperone DnaK
rifcsplowo2_01_scaffold_3029_20
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(19899..20399)
DNA (501bp) protein (167aa)
Protein GrpE id=5799563 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Protein GrpE Tax=AR15
molecular chaperone GrpE (heat shock protein)
rifcsplowo2_01_scaffold_3029_21
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

20510..20917
DNA (408bp) protein (136aa)
hypothetical protein Tax=CG_Woesearch_02
Putative uncharacterized protein id=5799558 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsplowo2_01_scaffold_3029_22

Not on your lists

20972..22456
DNA (1485bp) protein (495aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035C17CB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KHO53472.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
rifcsplowo2_01_scaffold_3029_23
unknown

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comp(22542..22772)
DNA (231bp) protein (77aa)

This feature has no annotations

rifcsplowo2_01_scaffold_3029_24
unknown

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comp(22925..23239)
DNA (315bp) protein (105aa)

This feature has no annotations

rifcsplowo2_01_scaffold_3029_25
Parcubacteria bacterium GW2011_GWA2_48_9, Parcubacteria, Bacteria

Not on your lists


comp(23592..24164)
DNA (573bp) protein (191aa)
50S ribosomal protein L15e {ECO:0000313|EMBL:KKU99679.1}; TaxID=1618850 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_48_9.;"
50S ribosomal protein L15e id=5799715 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
50S ribosomal protein L15
rifcsplowo2_01_scaffold_3029_26
unknown

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comp(24278..24649)
DNA (372bp) protein (124aa)

This feature has no annotations

rifcsplowo2_01_scaffold_3029_27
Parcubacteria bacterium GW2011_GWA2_48_9, Parcubacteria, Bacteria

Not on your lists

24741..25697
DNA (957bp) protein (319aa)
bifunctional phosphoglucose/phosphomannose isomerase (EC:5.3.1.8)
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI000360FED9
Bifunctional phosphoglucose/phosphomannose isomerase {ECO:0000313|EMBL:KKU99677.1}; TaxID=1618850 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_48_9.;"
Displaying 27 items

View Taxonomy