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rifcsplowo2_01_scaffold_5109

Search features with annotation key words

Displaying items 1-30 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_5109_1
AR5, Aenigmarchaeota, DPANN, Archaea

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3..188
-----------------
DNA (186bp)
protein (62aa)
30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 id=18248037 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 Tax=AR5
rps4p; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4
rifcsplowo2_01_scaffold_5109_2
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

185..385
-----------------
DNA (201bp)
protein (67aa)
T-complex 10/CenJ, C-terminal id=18248038 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
T-complex 10/CenJ, C-terminal Tax=AR5
rifcsplowo2_01_scaffold_5109_3

Not on your lists


379..771
-----------------
DNA (393bp)
protein (131aa)
rps11p; 30S ribosomal protein S11; K02948 small subunit ribosomal protein S11 id=18248039 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
30S ribosomal protein S11
rifcsplowo2_01_scaffold_5109_4
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

778..1566
-----------------
DNA (789bp)
protein (263aa)
rpoD; DNA-directed RNA polymerase subunit D (EC:2.7.7.6); K03047 DNA-directed RNA polymerase subunit D [EC:2.7.7.6] id=18248040 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
rpoD; DNA-directed RNA polymerase subunit D (EC:2.7.7.6); K03047 DNA-directed RNA polymerase subunit D [EC:2.7.7.6] Tax=AR5
rpoD; DNA-directed RNA polymerase subunit D (EC:2.7.7.6)
rifcsplowo2_01_scaffold_5109_5
unknown

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1987..2349
-----------------
DNA (363bp)
protein (121aa)

This feature has no annotations

rifcsplowo2_01_scaffold_5109_6
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists


2352..2684
-----------------
DNA (333bp)
protein (111aa)
LSU ribosomal protein L18AE id=18248041 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
LSU ribosomal protein L18AE Tax=AR5
LSU ribosomal protein L18AE
rifcsplowo2_01_scaffold_5109_7
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists


2681..3070
-----------------
DNA (390bp)
protein (130aa)
RplM; 50S ribosomal protein L13; K02871 large subunit ribosomal protein L13 id=18248042 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
RplM; 50S ribosomal protein L13; K02871 large subunit ribosomal protein L13 Tax=AR5
RplM; 50S ribosomal protein L13
rifcsplowo2_01_scaffold_5109_8
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists


3070..3519
-----------------
DNA (450bp)
protein (150aa)
30S ribosomal protein S9; K02996 small subunit ribosomal protein S9 id=18248043 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
30S ribosomal protein S9; K02996 small subunit ribosomal protein S9 Tax=AR5
30S ribosomal protein S9
rifcsplowo2_01_scaffold_5109_9
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists


3541..3735
-----------------
DNA (195bp)
protein (65aa)
RNA polymerase, N/8 Kd subunits; K03058 DNA-directed RNA polymerase subunit N [EC:2.7.7.6] id=5042095 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
RNA polymerase, N/8 Kd subunits; K03058 DNA-directed RNA polymerase subunit N [EC:2.7.7.6] Tax=AR5
RNA polymerase, N/8 Kd subunits
rifcsplowo2_01_scaffold_5109_10
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists


3753..4457
-----------------
DNA (705bp)
protein (235aa)
dimethyladenosine transferase; K02528 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] id=18248045 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
dimethyladenosine transferase; K02528 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] Tax=AR5
dimethyladenosine transferase (EC:2.1.1.-)
rifcsplowo2_01_scaffold_5109_11
unknown

Not on your lists

4566..5252
-----------------
DNA (687bp)
protein (229aa)

This feature has no annotations

rifcsplowo2_01_scaffold_5109_12
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(5245..5451)
-----------------
DNA (207bp)
protein (69aa)
id=18248047 bin=AR5_curated_draft tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
Tax=AR5
rifcsplowo2_01_scaffold_5109_13
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

5519..6523
-----------------
DNA (1005bp)
protein (335aa)
replication factor C large subunit; K04800 replication factor C large subunit id=18248048 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
replication factor C large subunit; K04800 replication factor C large subunit Tax=AR5
replication protein C
rifcsplowo2_01_scaffold_5109_14
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(6531..6941)
-----------------
DNA (411bp)
protein (137aa)
transmembrane_regions id=18248049 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
transmembrane_regions Tax=AR5
rifcsplowo2_01_scaffold_5109_15

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comp(7104..7397)
-----------------
DNA (294bp)
protein (98aa)
hypothetical protein; K09148 hypothetical protein id=5042100 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
Uncharacterized protein {ECO:0000313|EMBL:KHO48053.1}; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
hypothetical protein
rifcsplowo2_01_scaffold_5109_16
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(7448..7840)
-----------------
DNA (393bp)
protein (131aa)
translation initiation factor IF-2; K03238 translation initiation factor 2 subunit 2 id=5042101 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
translation initiation factor IF-2; K03238 translation initiation factor 2 subunit 2 Tax=AR5
Translation initiation factor 2 subunit beta
rifcsplowo2_01_scaffold_5109_17
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(8079..8426)
-----------------
DNA (348bp)
protein (116aa)
ribonuclease P protein component 2; K03537 ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5] id=5042102 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
ribonuclease P protein component 2; K03537 ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5] Tax=AR5
ribonuclease P protein component 2 (EC:3.1.26.5)
rifcsplowo2_01_scaffold_5109_18

Not on your lists

comp(8419..8823)
-----------------
DNA (405bp)
protein (135aa)
glmU; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase (EC:2.7.7.23); K04042 bifunctional UDP-N-acetylglucosamine pyrophosphorylase / Glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] id=5042103 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
Uncharacterized protein {ECO:0000313|EMBL:KHO48056.1}; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
putative DNA-binding protein with PD1-like DNA-binding motif
rifcsplowo2_01_scaffold_5109_19
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(8823..9512)
-----------------
DNA (690bp)
protein (230aa)
ribonuclease P protein component 3 (EC:3.1.26.5); K03539 ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5] id=18248054 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft rbh
ribonuclease P protein component 3 (EC:3.1.26.5); K03539 ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5] Tax=AR5
ribonuclease P protein subunit Rpp30 (EC:3.1.26.5)
rifcsplowo2_01_scaffold_5109_20

Not on your lists

comp(9661..9996)
-----------------
DNA (336bp)
protein (112aa)
PUA-like domain id=18248055 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
PUA-like protein {ECO:0000313|EMBL:KHO48058.1}; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
rifcsplowo2_01_scaffold_5109_21

Not on your lists

comp(10006..10497)
-----------------
DNA (492bp)
protein (164aa)
50S ribosomal protein L15e; K02877 large subunit ribosomal protein L15e id=5042106 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
Large subunit ribosomal protein L15e {ECO:0000313|EMBL:KHO48059.1}; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
50S ribosomal protein L15e
rifcsplowo2_01_scaffold_5109_22
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

10556..10792
-----------------
DNA (237bp)
protein (79aa)
transmembrane_regions id=18248057 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
transmembrane_regions Tax=AR5
rifcsplowo2_01_scaffold_5109_23

Not on your lists

11066..11809
-----------------
DNA (744bp)
protein (248aa)
radical SAM protein id=18248058 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
Radical SAM protein {ECO:0000313|EMBL:KHO48061.1}; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
radical SAM protein
rifcsplowo2_01_scaffold_5109_24
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

11875..13002
-----------------
DNA (1128bp)
protein (376aa)
hypothetical protein id=5042109 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
hypothetical protein Tax=AR5
hypothetical protein
rifcsplowo2_01_scaffold_5109_25
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

13239..13475
-----------------
DNA (237bp)
protein (79aa)
hypothetical protein id=18248060 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
hypothetical protein Tax=AR5
hypothetical protein
rifcsplowo2_01_scaffold_5109_26
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

13507..13962
-----------------
DNA (456bp)
protein (152aa)
Peptidase M4, propeptide, PepSY id=5042111 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
Peptidase M4, propeptide, PepSY Tax=AR5
rifcsplowo2_01_scaffold_5109_27
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(14247..15989)
-----------------
DNA (1743bp)
protein (581aa)
Uncharacterized protein id=18248063 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
Uncharacterized protein Tax=AR5
rifcsplowo2_01_scaffold_5109_28
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

16138..16632
-----------------
DNA (495bp)
protein (165aa)
transmembrane_regions id=18248064 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
transmembrane_regions Tax=AR5
rifcsplowo2_01_scaffold_5109_29
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(16742..17152)
-----------------
DNA (411bp)
protein (137aa)
alias=gwa2_scaffold_192_77 id=18248065 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
alias=gwa2_scaffold_192_77 Tax=AR5
rifcsplowo2_01_scaffold_5109_30

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comp(17155..18810)
-----------------
DNA (1656bp)
protein (552aa)
arginyl-tRNA synthetase; K01887 arginyl-tRNA synthetase [EC:6.1.1.19] id=5042116 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version! rbh
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=1579367 species="Archaea.;" so
arginyl-tRNA synthetase
Displaying items 1-30 of 60 in total

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