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rifcsphigho2_02_scaffold_5821

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_5821_1
unknown

Not on your lists

222..1619
-----------------
DNA (1398bp)
protein (466aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5821_2

Not on your lists

comp(1657..2295)
-----------------
DNA (639bp)
protein (213aa)
phage SPO1 DNA polymerase-like protein; K02334 DNA polymerase bacteriophage-type [EC:2.7.7.7] id=18248810 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
DNA polymerase bacteriophage-type {ECO:0000313|EMBL:KHO47645.1}; EC=2.7.7.7 {ECO:0000313|EMBL:KHO47645.1};; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
uracil-DNA glycosylase
rifcsphigho2_02_scaffold_5821_3
RIFOXYD2_FULL_RIF_OD1_02_43_21_curated, RIF-OD1-2, Parcubacteria, Bacteria

Not on your lists

comp(2309..3559)
-----------------
DNA (1251bp)
protein (417aa)
glycine hydroxymethyltransferase; K00600 glycine hydroxymethyltransferase [EC:2.1.2.1] Tax=RIFOXYD2_FULL_RIF_OD1_02_43_21_curated
glyA; serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase n=2 Tax=Staphylococcus simulans RepID=K8NAI9_STASI
rifcsphigho2_02_scaffold_5821_4
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

comp(3630..3959)
-----------------
DNA (330bp)
protein (110aa)
pterin-4-alpha-carbinolamine dehydratase Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
Putative pterin-4-alpha-carbinolamine dehydratase id=3543330 bin=GWF2_Geobacter_54_21 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Geobacter_54_21 organism_group=Deltaproteobacteria organism_desc=Good
transcriptional coactivator/pterin dehydratase
rifcsphigho2_02_scaffold_5821_5
CG_OP9-01, Atribacteria, Bacteria

Not on your lists

comp(3946..4356)
-----------------
DNA (411bp)
protein (137aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZFP2_9CLOT
hypothetical protein; K06934 Tax=CG_OP9-01
hypothetical protein
rifcsphigho2_02_scaffold_5821_6
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists

comp(4467..6026)
-----------------
DNA (1560bp)
protein (520aa)
thymidylate synthase complementing protein ThyX Tax=CG_Pacearch_04
Thymidylate synthase complementing protein ThyX family protein id=1263813 bin=GWE1_ACD58_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_ACD58_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Replace with complete genome
thymidylate synthase
rifcsphigho2_02_scaffold_5821_7
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

6328..8019
-----------------
DNA (1692bp)
protein (564aa)
DNA polymerase (family X) (EC:2.7.7.7) Tax=CG_Woesearch_01
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003760ED3
PHP domain-containing protein
rifcsphigho2_02_scaffold_5821_8
unknown

Not on your lists

8027..8959
-----------------
DNA (933bp)
protein (311aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5821_9
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

8965..9690
-----------------
DNA (726bp)
protein (242aa)
peptidil-prolyl cis-trans isomerase (EC:5.2.1.8); K03769 peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] Tax=CG_Woesearch_02
rifcsphigho2_02_scaffold_5821_10
Candidatus Omnitrophus sp. SKK-01, Candidatus Omnitrophus, Omnitrophica, Bacteria

Not on your lists

comp(9701..10327)
-----------------
DNA (627bp)
protein (209aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) l
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18)
Endonuclease III n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LI43_CHLTF
rifcsphigho2_02_scaffold_5821_11
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists

comp(10324..11106)
-----------------
DNA (783bp)
protein (261aa)
myo-inositol-1(or 4)-monophosphatase (EC:3.1.3.25); K01092 myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] id=7201874 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
myo-inositol-1(or 4)-monophosphatase (EC:3.1.3.25); K01092 myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] Tax=RIFOXYC12_FULL_TA06_54_24_curated
inositol-phosphate phosphatase (EC:3.1.3.25)
rifcsphigho2_02_scaffold_5821_12
unknown

Not on your lists

11189..12508
-----------------
DNA (1320bp)
protein (440aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5821_trna_1
unknown

Not on your lists

comp(12593..12676)
-----------------
DNA (84bp)
transferRNA
rifcsphigho2_02_scaffold_5821_13
GWA2_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12789..13694
-----------------
DNA (906bp)
protein (302aa)
Putative uncharacterized protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G8T8_GEOUR
hypothetical protein Tax=GWA2_Deltaproteobacteria_47_9_curated
hypothetical protein
rifcsphigho2_02_scaffold_5821_14
unknown

Not on your lists

13768..13911
-----------------
DNA (144bp)
protein (48aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5821_15
unknown

Not on your lists

13919..14215
-----------------
DNA (297bp)
protein (99aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5821_16

Not on your lists

14229..15305
-----------------
DNA (1077bp)
protein (359aa)
Conserved hypothetical membrane protein, DUF20 family n=1 Tax=uncultured archaeon RepID=D1JCI8_9ARCH
Conserved hypothetical membrane protein, DUF20 family {ECO:0000313|EMBL:CBH39818.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
htlA; Htr-like protein
rifcsphigho2_02_scaffold_5821_17
unknown

Not on your lists

15362..15742
-----------------
DNA (381bp)
protein (127aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5821_18
RIFOXYA2_FULL_Peregrinibacteria_33_7_curated, Peregrinibacteria, Bacteria

Not on your lists

15825..16397
-----------------
DNA (573bp)
protein (191aa)
metal dependent phosphohydrolase; K07023 putative hydrolases of HD superfamily Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated
Metal dependent phosphohydrolase id=3327835 bin=GWC1_CPR2_39_9 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
Metal dependent phosphohydrolase
rifcsphigho2_02_scaffold_5821_19
R_OD1_Kaiserbacteria_55_17, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

16399..16953
-----------------
DNA (555bp)
protein (185aa)
3-methyladenine DNA glycosylase (EC:3.2.2.21); K03652 DNA-3-methyladenine glycosylase [EC:3.2.2.21] Tax=RIFCSPHIGHO2_02_FULL_OD1_Kaiserbacteria_55_17_curated
DNA-3-methyladenine glycosylase (EC:3.2.2.21)
Putative 3-methyladenine DNA glycosylase n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0LGA8_9BACT
Displaying 20 items

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