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rifcsphigho2_02_scaffold_2287

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_2287_1
unknown

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comp(2..193)
-----------------
DNA (192bp)
protein (64aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2287_2
GWA2_OD1_31_28_partial, Parcubacteria, Bacteria

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comp(190..699)
-----------------
DNA (510bp)
protein (170aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP29130.1}; TaxID=1618806 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_31_28.;"
Putative uncharacterized protein id=4809988 bin=GWA2_OP3_52_12 species=Thermotoga lettingae genus=Thermotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
rifcsphigho2_02_scaffold_2287_3
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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888..1535
-----------------
DNA (648bp)
protein (216aa)
cpsE; Galactosyl transferase CpsE (EC:2.7.8.-)
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase family protein n=1 Tax=Clostridium sordellii ATCC 9714 RepID=T0E3T7_CLOSO
Capsular polysaccharide biosynthsis protein {ECO:0000313|EMBL:CEO27930.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clost
rifcsphigho2_02_scaffold_2287_4
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1548..2456
-----------------
DNA (909bp)
protein (303aa)
Daunorubicin resistance ATP-binding drrA-like protein n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LIS1_THEBM
daunorubicin resistance ATP-binding drrA-like protein
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:CCQ92784.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense
rifcsphigho2_02_scaffold_2287_5

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2453..3241
-----------------
DNA (789bp)
protein (263aa)
Uncharacterized protein n=2 Tax=Pyrococcus furiosus RepID=I6U9E9_9EURY
Marine sediment metagenome DNA, contig: S01H4_S07883 {ECO:0000313|EMBL:GAH03319.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
ABC-type multidrug transport system, permease component
rifcsphigho2_02_scaffold_2287_6
unknown

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comp(3179..4390)
-----------------
DNA (1212bp)
protein (404aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2287_7
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

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comp(4779..5792)
-----------------
DNA (1014bp)
protein (338aa)
Putative membrane protein n=1 Tax=Bacteriovorax marinus (strain ATCC BAA-682 / DSM 15412 / SJ) RepID=E1X0G2_BACMS
hypothetical protein Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
hypothetical protein
rifcsphigho2_02_scaffold_2287_8
Thermococcus eurythermalis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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comp(5785..6879)
-----------------
DNA (1095bp)
protein (365aa)
Glycosyltransferase, family 4 n=1 Tax=Thermococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) RepID=Q5JJ13_THEKO
glycosyl transferase
Thermococcus eurythermalis strain A501, complete genome {ECO:0000313|EMBL:AIU69533.1}; TaxID=1505907 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" sour
rifcsphigho2_02_scaffold_2287_9
GWA1_Berkelbacteria_36_10, Berkelbacteria, Bacteria

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comp(6895..7140)
-----------------
DNA (246bp)
protein (82aa)
Tax=GWA1_Berkelbacteria_36_10
rifcsphigho2_02_scaffold_2287_10
RIFOXYA2_FULL_Melainabacteria_32_9_curated, Melainabacteria, Bacteria

Not on your lists

7561..10065
-----------------
DNA (2505bp)
protein (835aa)
Spermidine synthase-like protein n=1 Tax=uncultured bacterium RepID=K2FSV9_9BACT
hypothetical protein Tax=RIFOXYA2_FULL_Melainabacteria_32_9_curated
putative SAM-dependent methyltransferase
rifcsphigho2_02_scaffold_2287_11
Methanoculleus sp. MH98A, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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comp(10050..11180)
-----------------
DNA (1131bp)
protein (377aa)
Glycosyl transferase, group 1 n=1 Tax=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) RepID=A3CRW7_METMJ
glycosyl transferase, group 1
Glycosyl transferase family 1 {ECO:0000313|EMBL:KDE54608.1}; TaxID=1495314 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanoculleus.;" source="Methanoc
rifcsphigho2_02_scaffold_2287_12
unknown

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comp(11380..12492)
-----------------
DNA (1113bp)
protein (371aa)
Glycosyl transferase family 2 n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EZQ4_CONWI id=5102946 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Glycosyl transferase family 2 n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EZQ4_CONWI Tax=AR20
Glycosyl transferase family 2
rifcsphigho2_02_scaffold_2287_13
Streptomyces viridochromogenes, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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12569..13522
-----------------
DNA (954bp)
protein (318aa)
Bi-functional transferase/deacetylase n=1 Tax=Streptomyces viridochromogenes DSM 40736 RepID=D9X735_STRVR
Bi-functional transferase/deacetylase {ECO:0000313|EMBL:EFL34102.1}; TaxID=591159 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces viridochr
glycosyl transferase family protein
rifcsphigho2_02_scaffold_2287_14
RBG_16_Caldithrix_48_16_curated, Caldithrix, Bacteria

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13501..14409
-----------------
DNA (909bp)
protein (303aa)
Glycosyl transferase n=1 Tax=Rheinheimera sp. A13L RepID=F7NV69_9GAMM
Glycosyltransferase Tax=RBG_16_Caldithrix_48_16_curated
family 2 glycosyl transferase
rifcsphigho2_02_scaffold_2287_15

Not on your lists

14484..15518
-----------------
DNA (1035bp)
protein (345aa)
CDP-paratose 2-epimerase (EC:5.1.3.10)
CDP-paratose 2-epimerase id=5800117 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
CDP-paratose 2-epimerase {ECO:0000313|EMBL:AJF61448.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
rifcsphigho2_02_scaffold_2287_16
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

15515..16486
-----------------
DNA (972bp)
protein (324aa)
putative glycosyltransferase (EC:2.4.-.-) Tax=CG_Woesearch_03
Similar to family 2 glycosyltransferase SpsQ id=4838557 bin=GWC2_Planctomycete_KSU_39_26 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
glycosyl transferase family 2
rifcsphigho2_02_scaffold_2287_17
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

16582..18810
-----------------
DNA (2229bp)
protein (743aa)
topA; DNA topoisomerase I; K03168 DNA topoisomerase I [EC:5.99.1.2] Tax=CG_Woesearch_01
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003703E52
DNA topoisomerase 1
rifcsphigho2_02_scaffold_2287_18
unknown

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18843..19415
-----------------
DNA (573bp)
protein (191aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2287_19
unknown

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19450..20214
-----------------
DNA (765bp)
protein (255aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2287_20
unknown

Not on your lists

20207..22465
-----------------
DNA (2259bp)
protein (753aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2287_21
unknown

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22411..24630
-----------------
DNA (2220bp)
protein (740aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2287_22
CG_Micra_05, Micraarchaeota, Archaea

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24851..25966
-----------------
DNA (1116bp)
protein (372aa)
hypothetical protein Tax=CG_Micra_05
id=5047492 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsphigho2_02_scaffold_2287_23
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(25953..27881)
-----------------
DNA (1929bp)
protein (643aa)
threonyl-tRNA synthetase (EC:6.1.1.3); K01868 threonyl-tRNA synthetase [EC:6.1.1.3] Tax=CG_Woesearch_02
thrS; threonyl-tRNA synthetase (EC:6.1.1.3)
Threonine--tRNA ligase n=1 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LW80_TEPAE
Displaying 23 items

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