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rifcsphigho2_02_scaffold_6084

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_6084_1
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(1..540)
-----------------
DNA (540bp)
protein (180aa)
hypothetical protein; K10747 DNA ligase 1 [EC:6.5.1.1] Tax=RBG_13_Woesearchaeota_36_6_curated
DNA ligase id=5800225 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
ATP-dependent DNA ligase
rifcsphigho2_02_scaffold_6084_2
GWA2_WOR_2_47_8_curated, WOR-2, Bacteria

Not on your lists

744..3329
-----------------
DNA (2586bp)
protein (862aa)
PGAP1 family protein Tax=GWA2_WOR_2_47_8_curated
PGAP1 family protein id=5799748 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
PGAP1-like protein
rifcsphigho2_02_scaffold_6084_3
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

3379..4041
-----------------
DNA (663bp)
protein (221aa)
nitroreductase Tax=AR11
Nitroreductase id=5799753 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
nitroreductase family protein
rifcsphigho2_02_scaffold_6084_4
unknown

Not on your lists

4119..5024
-----------------
DNA (906bp)
protein (302aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JBW5_9ARCH id=5103508 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JBW5_9ARCH Tax=AR20
hypothetical protein
rifcsphigho2_02_scaffold_6084_5
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(5373..6431)
-----------------
DNA (1059bp)
protein (353aa)
cell division protein FtsZ; K03531 cell division protein FtsZ Tax=CG_Woesearch_01
cell division protein FtsZ; K03531 cell division protein FtsZ id=5044675 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Cell division protein FtsZ
rifcsphigho2_02_scaffold_6084_6
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

6761..7528
-----------------
DNA (768bp)
protein (256aa)
probable diphthine synthase-like; K00586 diphthine synthase [EC:2.1.1.98] Tax=AR11
diphthine synthase (EC:2.1.1.98)
Uncharacterized protein id=5799750 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_02_scaffold_6084_7
GWC2_OD1_38_7, Parcubacteria, Bacteria

Not on your lists

comp(7552..8214)
-----------------
DNA (663bp)
protein (221aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ78665.1}; Flags: Fragment;; TaxID=1618920 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_38_7.;"
UPI000038E2D0 related cluster id=5800598 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
conserved archaeal protein, aspartokinase domain protein
rifcsphigho2_02_scaffold_6084_8
unknown

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8257..8436
-----------------
DNA (180bp)
protein (60aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6084_9
GWF2_Planctomycetes_42_9_curated, Phycisphaerae, Planctomycetes, Bacteria

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8560..9702
-----------------
DNA (1143bp)
protein (381aa)
Putative uncharacterized protein id=3810685 bin=GWF2_Planctomycetes_42_9 species=Desulfotomaculum acetoxidans genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Planctomycetes_42_9 organism_group=Planctomycetes
hypothetical protein Tax=GWF2_Planctomycetes_42_9_curated
hypothetical protein
rifcsphigho2_02_scaffold_6084_10

Not on your lists

9707..10792
-----------------
DNA (1086bp)
protein (362aa)
Aminotransferase class V n=1 Tax=uncultured prokaryote RepID=H5SIQ3_9ZZZZ
Aminotransferase class V {ECO:0000313|EMBL:BAL56039.1}; TaxID=198431 species="unclassified sequences; environmental samples.;" source="uncultured prokaryote.;"
aspartate/glutamate/phosphoserine/alanine/cystea te aminotransferase
rifcsphigho2_02_scaffold_6084_11
BJP_IG2069_Syntrophobacterales_46_30, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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10799..11983
-----------------
DNA (1185bp)
protein (395aa)
Phosphoglycerate dehydrogenase-like oxidoreductase id=1750112 bin=GWE2_RBX1_39_32 species=Clostridium clariflavum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein
Tax=BJP_IG2069_Syntrophobacterales_46_30
rifcsphigho2_02_scaffold_6084_trna_1
unknown

Not on your lists

12068..12162
-----------------
DNA (95bp)
transferRNA
rifcsphigho2_02_scaffold_6084_12
unknown

Not on your lists

comp(12331..13233)
-----------------
DNA (903bp)
protein (301aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6084_13
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists


13371..13826
-----------------
DNA (456bp)
protein (152aa)
30S ribosomal protein S15/S13e id=5799745 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
30S ribosomal protein S15/S13e Tax=AR15
rps15p; 30S ribosomal protein S15P
rifcsphigho2_02_scaffold_6084_14
unknown

Not on your lists

13912..15531
-----------------
DNA (1620bp)
protein (540aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6084_15
CG_CPR07_01, CG_CPR07, Bacteria

Not on your lists

comp(15733..16815)
-----------------
DNA (1083bp)
protein (361aa)
Dimethylallyltranstransferase; K13787 geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] Tax=CG_CPR07_01
Polyprenyl synthetase n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IFK7_ACIB4
Polyprenyl synthetase
rifcsphigho2_02_scaffold_6084_16

Not on your lists

comp(16805..17725)
-----------------
DNA (921bp)
protein (307aa)
Small subunit ribosomal protein S1, 4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000313|EMBL:KHO49716.1}; EC=1.17.1.2 {ECO:0000313|EMBL:KHO49716.1};; Flags: Fragment;; TaxID=1579371 specie
ispH; hydroxymethylbutenyl pyrophosphate reductase (EC:1.17.1.2)
hypothetical protein n=1 Tax=unclassified candidate division KSB1 RepID=UPI00038048B9
rifcsphigho2_02_scaffold_6084_17
unknown

Not on your lists

comp(17728..18378)
-----------------
DNA (651bp)
protein (217aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6084_18
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(18412..18618)
-----------------
DNA (207bp)
protein (69aa)
hypothetical protein Tax=AR11
rifcsphigho2_02_scaffold_6084_19
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(18682..18948)
-----------------
DNA (267bp)
protein (89aa)
4fe-4S ferredoxin IroN-sulfur binding domaiN-containing protein
4fe-4S ferredoxin IroN-sulfur binding domaiN-containing protein Tax=AR11
ferredoxin; K05337 ferredoxin id=5048736 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsphigho2_02_scaffold_6084_20

Not on your lists

comp(19077..20603)
-----------------
DNA (1527bp)
protein (509aa)
imp cyclohydrolase; phosphoribosylaminoimidazolecarboxamide formyltransferase (EC:2.1.2.3 3.5.4.10); K00602 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] id=5043644 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
purH; bifunctional purine biosynthesis protein PurH (EC:2.1.2.3 3.5.4.10)
Bifunctional purine biosynthesis protein PurH {ECO:0000313|EMBL:KHO52877.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
rifcsphigho2_02_scaffold_6084_21

Not on your lists

comp(20611..21243)
-----------------
DNA (633bp)
protein (211aa)
purN; phosphoribosylglycinamide formyltransferase; K11175 phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] id=5043646 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Phosphoribosylglycinamide formyltransferase 1 {ECO:0000313|EMBL:KHO46622.1}; EC=2.1.2.2 {ECO:0000313|EMBL:KHO46622.1};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
rifcsphigho2_02_scaffold_6084_22

Not on your lists

comp(21301..22149)
-----------------
DNA (849bp)
protein (283aa)
5,10-methylene-tetrahydrofolate cyclohydrolase (EC:1.5.1.5 3.5.4.9)
Marine sediment metagenome DNA, contig: S01H1_L00509 {ECO:0000313|EMBL:GAF84278.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
Bifunctional protein FolD id=2823241 bin=GWC1_KAZAN_52_13 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWC1_KAZAN_52_13 organism_group=Kazan
rifcsphigho2_02_scaffold_6084_23

Not on your lists

comp(22260..23573)
-----------------
DNA (1314bp)
protein (438aa)
glycine hydroxymethyltransferase; K00600 glycine hydroxymethyltransferase [EC:2.1.2.1] id=5043649 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.- {ECO:0000256|HAM
glyA; glycine hydroxymethyltransferase (EC:2.1.2.1)
rifcsphigho2_02_scaffold_6084_24
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(23595..24401)
-----------------
DNA (807bp)
protein (269aa)
lipoate-protein ligase A (EC:2.7.7.63)
biotin/lipoate A/B protein ligase; K03800 lipoate-protein ligase A [EC:2.7.7.63] id=5240860 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
biotin/lipoate A/B protein ligase; K03800 lipoate-protein ligase A [EC:2.7.7.63] Tax=AR10
rifcsphigho2_02_scaffold_6084_25
Exiguobacterium sibiricum, Exiguobacterium, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24541..25464)
-----------------
DNA (924bp)
protein (308aa)
Lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoic
Lipoyl synthase n=1 Tax=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) RepID=B1YKX9_EXIS2
lipoyl synthase
rifcsphigho2_02_scaffold_6084_26
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25468..26040)
-----------------
DNA (573bp)
protein (191aa)
5-formyltetrahydrofolate cyclo-ligase (EC:6.3.3.2)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B2B8_CLOA9
rifcsphigho2_02_scaffold_6084_27
unknown

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comp(26093..26443)
-----------------
DNA (351bp)
protein (117aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6084_28
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(26443..26721)
-----------------
DNA (279bp)
protein (93aa)
seg 26..35 Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
rifcsphigho2_02_scaffold_6084_29
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

26806..27657
-----------------
DNA (852bp)
protein (284aa)
Tax=AR11
Displaying items 1-30 of 39 in total

View Taxonomy