ggKbase home page

rifcsphigho2_02_scaffold_3326_19

Organism: RIFCSPHIGHO2_02_FULL_Archaea_Woesearchaeota_40_54

near complete RP 37 / 55 MC: 7 BSCG 17 / 51 ASCG 33 / 38 MC: 3
Location: 13449..13982

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal protein L16 {ECO:0000313|EMBL:KHO51722.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.3
  • Coverage: 173.0
  • Bit_score: 239
  • Evalue 4.00e-60
50S ribosomal protein L10e id=5800536 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized similarity UNIREF
DB: UNIREF100
  • Identity: 54.7
  • Coverage: 170.0
  • Bit_score: 201
  • Evalue 6.70e-49
50S ribosomal protein L10e similarity KEGG
DB: KEGG
  • Identity: 53.4
  • Coverage: 163.0
  • Bit_score: 175
  • Evalue 1.90e-41

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

archaeon GW2011_AR11 → Archaea

Sequences

DNA sequence
Length: 534
ATGGCAAGGCTCAGAAAATTTGTCGCTTACCGGAGGCTTGAAAGACCCTACACAAGGACGTCAAAGTTCAAGGCAAAGTCTTACATAAAGATGACTCCGAACGTTAAGGTAGTCAGGTTTGACACCGGAGACGCAAGCAGGGATTTTAAATTTACCTTAAACCTGCTCTCAAAGTCGGATTTGCAAATCAGGGACAATGCGCTGGAAAGCGCAAGGCAAACCTCAAACAAGCTGCTGGAAACGCATCTTGGCTTGAACGGGTTTCACTTGAAAGTGAAAGTGTATCCGTATCATGTTCTCAGGGAGCACGCCCTTGCATCTGGCGCAGGCGCTGACAGGTTCAGTTCAGGCATGGCGCATTCATTTGGCAAGCCGATTGGCTTGGCCGCAAGAGTCAAAAAAGGGCAGGCAATTTTCCAGGTGAGCGTGGACAGGCAGAATCTTGAGGTTGCAAAGCAGGCGCTTGAAAGGGCCTCGAAGAAGCTTCCTTGCTCGTGCACGATACAGCTTACTGACAATAAAAATATCAAGTAA
PROTEIN sequence
Length: 178
MARLRKFVAYRRLERPYTRTSKFKAKSYIKMTPNVKVVRFDTGDASRDFKFTLNLLSKSDLQIRDNALESARQTSNKLLETHLGLNGFHLKVKVYPYHVLREHALASGAGADRFSSGMAHSFGKPIGLAARVKKGQAIFQVSVDRQNLEVAKQALERASKKLPCSCTIQLTDNKNIK*