ggKbase home page
This organism can only be binned in the context of its binning project GWD1. Please contact the project owner (jbanfield@berkeley.edu) to become a member and gain access.

rifcsphigho2_02_scaffold_3326_20

Organism: RIFCSPHIGHO2_02_FULL_Archaea_Woesearchaeota_40_54

near complete RP 37 / 55 MC: 7 BSCG 17 / 51 ASCG 33 / 38 MC: 3
Location: 14045..15094

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein, partial n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003804E87 similarity UNIREF
DB: UNIREF100
  • Identity: 46.1
  • Coverage: 345.0
  • Bit_score: 312
  • Evalue 5.30e-82
mechanosensitive ion channel MscS Tax=CG_Pacearch_01 similarity UNIPROT
DB: UniProtKB
  • Identity: 48.4
  • Coverage: 347.0
  • Bit_score: 318
  • Evalue 1.30e-83
MscS mechanosensitive ion channel similarity KEGG
DB: KEGG
  • Identity: 34.2
  • Coverage: 336.0
  • Bit_score: 197
  • Evalue 5.30e-48

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CG_Pacearch_01 → Pacearchaeota → Archaea

Sequences

DNA sequence
Length: 1050
ATGGTTCTCGAATTGCTCGACAATATTACTCCAAACAAGTACCTCCATTCTGCTATCATACTCCTGATTTTTTATGCATTGTCGCAGCTTGTCGTATTTATTTCCCAGAGGGTGATACTCCAGCTCACCAAAAAGACAAAAACCAACTTGGATGACTTGATAGTCTCCAAAACAAACAAGCCCATATCACTTATACTGATACTTCTTGGGCTTAGGCTTGCGATAATTCCGCACAAGGTGAAGCCGTACATACTGGACGTATTCGAGCATATCGTTGCATCGCTGATTGTTGTGATGGTTGCTTACATATTCATTGTCGTCTTTGACATACTTATAATAAACTGGGGCAGGAAGTTTGCCGCAAAAACCGAGTCGAAGGTTGATGACGAGGTTGTGCTTCTGTTCCAGAGGTTTTCCAGAATAACGCTGAGCCTTATAGGGCTGATTTTTATACTTAATGTTTGGGGAATTGAAGTTGCTCCTTTGCTTGCAAGCCTTGGTATTGCTGGAATTGCTGTTGCTTTTGCCCTGCAGAGCACTCTCGGCAACATTTTTGGAGGCATATCCCTTATTGTCGACAAGAGCATTACAGTTGATGATTTCATAAGGCTCGAGGACGGCACAGAGGGCAAAGTAACAGACATTGGATTGAGGAGCACAAAAATAAAAAGCAGGGACGGCGACTTGGTTATACTCCCGAATGGCAAGCTTGCTGACTCAAAGATATACAATTACCACAAGCCGCTGCCGATAACAAGAGCCACTGTTGACTTTAGCGTCAAGTACGGCTCTGAGCCCGAAAAAGCCAGGAAAATCGCGCTTGATGAATTAAAAAAAATAAAATATGTGCTGAAAGAGCCCGTCCCTGTTGTTATTTTTGCCGAAATGGGCGAGTTCGCGCTTAAGTTCAAGGCGCATTTCTGGGTTAAGTCCATAAATGAAAAAATAGAGGCAAAAGATGCTGCCACAACAGCCATATACAACGCCCTCAACAGGAACAAGATAACTATACCATTCCCTACAAGGACGGTTTACCTGAAAAAGGGCTGA
PROTEIN sequence
Length: 350
MVLELLDNITPNKYLHSAIILLIFYALSQLVVFISQRVILQLTKKTKTNLDDLIVSKTNKPISLILILLGLRLAIIPHKVKPYILDVFEHIVASLIVVMVAYIFIVVFDILIINWGRKFAAKTESKVDDEVVLLFQRFSRITLSLIGLIFILNVWGIEVAPLLASLGIAGIAVAFALQSTLGNIFGGISLIVDKSITVDDFIRLEDGTEGKVTDIGLRSTKIKSRDGDLVILPNGKLADSKIYNYHKPLPITRATVDFSVKYGSEPEKARKIALDELKKIKYVLKEPVPVVIFAEMGEFALKFKAHFWVKSINEKIEAKDAATTAIYNALNRNKITIPFPTRTVYLKKG*