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rifcsphigho2_02_scaffold_5663

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_5663_1
unknown

Not on your lists

comp(2..121)
-----------------
DNA (120bp)
protein (40aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5663_2

Not on your lists

comp(122..859)
-----------------
DNA (738bp)
protein (246aa)
Putative uncharacterized protein n=1 Tax=Staphylococcus simiae CCM 7213 RepID=G5JHK9_9STAP id=5102938 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF62219.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsphigho2_02_scaffold_5663_3
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists

918..2111
-----------------
DNA (1194bp)
protein (398aa)
Putative GTPase, probable translation factor n=1 Tax=nanoarchaeote Nst1 RepID=R1E424_9ARCH id=5103591 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
GTPase; K06942 Tax=CG_Pacearch_04
hypothetical protein
rifcsphigho2_02_scaffold_5663_4
Thermoplasma acidophilum, Thermoplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(2202..3281)
-----------------
DNA (1080bp)
protein (360aa)
Proline dipeptidase related protein n=1 Tax=Thermoplasma acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165) RepID=Q9HJD2_THEAC
proline dipeptidase
Proline dipeptidase related protein {ECO:0000313|EMBL:CAC12166.1}; TaxID=273075 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Thermoplasmataceae; Thermoplasma.;" source="Thermopl
rifcsphigho2_02_scaffold_5663_5
unknown

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comp(3307..3735)
-----------------
DNA (429bp)
protein (143aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5663_6
R_RIF_OD1_07_41_9, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

comp(3768..4442)
-----------------
DNA (675bp)
protein (225aa)
LmbE family protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C7G6_SPHTD
GlcNAc-PI de-N-acetylase family Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_07_41_9_curated
LmbE family protein
rifcsphigho2_02_scaffold_5663_7
PER_GWC2_41_7, PER_GWC2_41_7, PER_GWC2_41_7, PER_GWC2_41_7, Peregrinibacteria, Bacteria

Not on your lists

comp(4482..4859)
-----------------
DNA (378bp)
protein (126aa)
id=4759205 bin=PER_GWC2_41_7 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
id=4759205 bin=PER_GWC2_41_7 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
rifcsphigho2_02_scaffold_5663_8
RHI_OD1_Uhrbacteria_60_25, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

4985..5410
-----------------
DNA (426bp)
protein (142aa)
doc; death on curing protein; K07341 death on curing protein Tax=RIFCSPHIGHO2_12_FULL_OD1_Uhrbacteria_60_25_curated
rifcsphigho2_02_scaffold_5663_9
unknown

Not on your lists

comp(5557..5652)
-----------------
DNA (96bp)
protein (32aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5663_10
unknown

Not on your lists

comp(5730..5858)
-----------------
DNA (129bp)
protein (43aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5663_11

Not on your lists

6142..7173
-----------------
DNA (1032bp)
protein (344aa)
Cell division protein FtsZ 2 id=4759206 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU003360}; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
cell division protein FtsZ
rifcsphigho2_02_scaffold_5663_12
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

Not on your lists

comp(7230..8030)
-----------------
DNA (801bp)
protein (267aa)
Restriction endonuclease n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AUZ9_9ARCH
restriction endonuclease Tax=RBG_16_Micrarchaeota_36_9_curated
restriction endonuclease
rifcsphigho2_02_scaffold_5663_trna_2
unknown

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comp(8430..8558)
-----------------
DNA (129bp)
transferRNA
rifcsphigho2_02_scaffold_5663_13
Methanocaldococcus fervens, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

comp(8771..9721)
-----------------
DNA (951bp)
protein (317aa)
clamp loader protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036B2485
DNA replication ATPase
Replication factor C small subunit {ECO:0000256|HAMAP-Rule:MF_01509}; Short=RFC small subunit {ECO:0000256|HAMAP-Rule:MF_01509};; Clamp loader small subunit {ECO:0000256|HAMAP-Rule:MF_01509}; TaxID=57
rifcsphigho2_02_scaffold_5663_14
CG_Micra_01, Micraarchaeota, Archaea

Not on your lists

9770..11524
-----------------
DNA (1755bp)
protein (585aa)
hypothetical protein
transglutaminase id=4120969 bin=PER_GWC2_41_7 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
hypothetical protein Tax=CG_Micra_01
rifcsphigho2_02_scaffold_5663_15
Archaeoglobus profundus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

11521..12078
-----------------
DNA (558bp)
protein (186aa)
adenylate kinase (EC:2.7.4.3)
Putative adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00039}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00039};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00039};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-R
Putative adenylate kinase n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RGC4_ARCPA
rifcsphigho2_02_scaffold_5663_16
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

12097..12912
-----------------
DNA (816bp)
protein (272aa)
endopeptidase htpX (EC:3.4.24.-); K03799 heat shock protein HtpX [EC:3.4.24.-] id=14625131 bin=bin7_NC10_sister species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
endopeptidase htpX (EC:3.4.24.-); K03799 heat shock protein HtpX [EC:3.4.24.-] Tax=CSP1_6_Rokubacteria
htpX; protease htpX (EC:3.4.24.-)
rifcsphigho2_02_scaffold_5663_17
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

12949..13134
-----------------
DNA (186bp)
protein (62aa)
id=4120975 bin=PER_GWC2_41_7 species=nanoarchaeote Nst1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Nanoarchaeota tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
50S ribosomal protein L40E Tax=CG_Aenigma_01
rifcsphigho2_02_scaffold_5663_18

Not on your lists

13357..14118
-----------------
DNA (762bp)
protein (254aa)
alpha/beta hydrolase fold protein id=5045814 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:KHO46427.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
rifcsphigho2_02_scaffold_5663_19
Thermoplasma acidophilum, Thermoplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

14115..14906
-----------------
DNA (792bp)
protein (264aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037B9578
(S)-2,3-di-O-geranylgeranylglyceryl phosphate synthase
Uncharacterized protein {ECO:0000313|EMBL:CAC12125.1}; TaxID=273075 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Thermoplasmataceae; Thermoplasma.;" source="Thermoplasma acidoph
rifcsphigho2_02_scaffold_5663_20
PER_GWC2_41_7, PER_GWC2_41_7, PER_GWC2_41_7, PER_GWC2_41_7, Peregrinibacteria, Bacteria

Not on your lists

15043..15330
-----------------
DNA (288bp)
protein (96aa)
id=3673928 bin=PER_GWC2_41_7 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
id=3673928 bin=PER_GWC2_41_7 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
rifcsphigho2_02_scaffold_5663_21
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15334..15696)
-----------------
DNA (363bp)
protein (121aa)
Metallopeptidase-like protein id=3673925 bin=PER_GWC2_41_7 species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
metallopeptidase Tax=RBG_16_Deltaproteobacteria_54_11_curated
metallopeptidase
rifcsphigho2_02_scaffold_5663_trna_1
unknown

Not on your lists

15758..15858
-----------------
DNA (101bp)
transferRNA
rifcsphigho2_02_scaffold_5663_22
Methanosphaerula palustris, Methanosphaerula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

16141..17385
-----------------
DNA (1245bp)
protein (415aa)
PKD domain containing protein n=1 Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GF92_METPE
PKD domain-containing protein
PKD domain containing protein {ECO:0000313|EMBL:ACL17898.1}; Flags: Precursor;; TaxID=521011 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanosphaerula.;
Displaying 24 items

View Taxonomy