ggKbase home page

rifcsphigho2_02_scaffold_5880

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_5880_1
unknown

Not on your lists

comp(127..234)
DNA (108bp) protein (36aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5880_2
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(278..1201)
DNA (924bp) protein (308aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036745B5
hypothetical protein Tax=RBG_16_Euryarchaeota_41_19_curated
rifcsphigho2_02_scaffold_5880_3

Not on your lists

1437..2024
DNA (588bp) protein (196aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO51308.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
id=5045972 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsphigho2_02_scaffold_5880_4

Not on your lists

2624..3064
DNA (441bp) protein (147aa)
DUTP pyrophosphatase {ECO:0000313|EMBL:KHO51423.1}; EC=3.6.1.23 {ECO:0000313|EMBL:KHO51423.1};; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
dut; deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23)
Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=Nautilia profundicola (strain ATCC BAA-1463 / DSM 18972 / AmH) RepID=DUT_NAUPA
rifcsphigho2_02_scaffold_5880_5
unknown

Not on your lists

3305..3535
DNA (231bp) protein (77aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5880_6
RIFOXYA2_FULL_RIF01_40_8_curated, RIF1, Bacteria

Not on your lists

3627..4433
DNA (807bp) protein (269aa)
anaerobic ribonucleoside-triphosphate reductase activating protein; K04069 pyruvate formate lyase activating enzyme [EC:1.97.1.4] Tax=RIFOXYA2_FULL_RIF01_40_8_curated
anaerobic ribonucleoside-triphosphate reductase activating protein; K04069 pyruvate formate lyase activating enzyme [EC:1.97.1.4] id=5049189 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
anaerobic ribonucleoside-triphosphate reductase activating protein
rifcsphigho2_02_scaffold_5880_7
RIFOXYC2_FULL_OD1_Falkowbacteria_48_21_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(4607..5836)
DNA (1230bp) protein (410aa)
lipoprotein Tax=RIFOXYC2_FULL_OD1_Falkowbacteria_48_21_curated
rifcsphigho2_02_scaffold_5880_8
RBG_13_OP11_Gottesmanbacteria_37_7_curated, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(5914..6669)
DNA (756bp) protein (252aa)
zinc/iron permease Tax=RBG_13_OP11_Gottesmanbacteria_37_7_curated
Putative uncharacterized protein id=4268954 bin=GWF2_CPR3_35_18 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWF2_CPR3_35_18 organism_group=CPR3
zinc/iron permease
rifcsphigho2_02_scaffold_5880_9

Not on your lists

comp(6790..7896)
DNA (1107bp) protein (369aa)
Dead/deah box helicase domain-containing protein (DeaD) {ECO:0000313|EMBL:AIF18658.1}; EC=3.6.4.13 {ECO:0000313|EMBL:AIF18658.1};; TaxID=1456522 species="Archaea; Euryarchaeota; environmental samples.
hypothetical protein n=1 Tax=Bacillus massiliosenegalensis RepID=UPI000379507A
srmB; DEAD box ATP-dependent RNA helicase
rifcsphigho2_02_scaffold_5880_10

Not on your lists

comp(7893..8630)
DNA (738bp) protein (246aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO51337.1}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
GTP-binding protein YlqF; K06948 id=5047469 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
GTP-binding protein YlqF
rifcsphigho2_02_scaffold_5880_11
unknown

Not on your lists

comp(8746..9039)
DNA (294bp) protein (98aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5880_12
RIFOXYB2_FULL_WOR_2_38_16_curated, WOR-2, Bacteria

Not on your lists

comp(9271..10098)
DNA (828bp) protein (276aa)
Redox-active membrane protein id=3623454 bin=GWF2_OP3_38_59 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159 rbh
hypothetical protein Tax=RIFOXYB2_FULL_WOR_2_38_16_curated
redox-active membrane protein
rifcsphigho2_02_scaffold_5880_13
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(10443..10763)
DNA (321bp) protein (107aa)
Thioredoxin n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UUA5_ROSS1
thioredoxin; K03671 thioredoxin 1 Tax=CG_Woesearch_02
thioredoxin
rifcsphigho2_02_scaffold_5880_14
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(11051..13465)
DNA (2415bp) protein (805aa)
phosphoenolpyruvate synthase; K01007 pyruvate, water dikinase [EC:2.7.9.2] Tax=RBG_13_Woesearchaeota_36_6_curated
ppsA5; protein PpsA5 (EC:2.7.9.2)
Phosphoenolpyruvate synthase n=1 Tax=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) RepID=C0QEP8_DESAH rbh
rifcsphigho2_02_scaffold_5880_15
unknown

Not on your lists

comp(13669..14880)
DNA (1212bp) protein (404aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5880_16

Not on your lists

15293..16468
DNA (1176bp) protein (392aa)
id=5048011 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45605.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsphigho2_02_scaffold_5880_17
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

16696..18837
DNA (2142bp) protein (714aa)
5-Enolpyruvylshikimate-3-phosphate synthase (EC:2.5.1.19)
Uncharacterized protein (Fragment) n=1 Tax=Eimeria brunetti RepID=U6LA78_9EIME
Marine sediment metagenome DNA, contig: S12H4_S22284 Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsphigho2_02_scaffold_5880_18
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(18885..19193)
DNA (309bp) protein (103aa)
Tax=RBG_13_Pacearchaeota_33_26_curated
Displaying 18 items

View Taxonomy