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rifcsphigho2_02_scaffold_16394

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_16394_1
AR13, Pacearchaeaota, DPANN, Archaea

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comp(3..929)
DNA (927bp) protein (309aa)
gltX; glutamyl-tRNA synthetase (EC:6.1.1.17)
Glutamate--tRNA ligase n=1 Tax=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) RepID=SYE_METTH
Glutamate--tRNA ligase Tax=AR13
rifcsphigho2_02_scaffold_16394_2
CG_Woesearch_02, Woesearchaeota, Archaea

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1203..1421
DNA (219bp) protein (73aa)
Transcription factor CBF/NF-Y/histone domain-containing protein id=2175381 bin=GWA2_Bacteroidetes_42_15 species=nanoarchaeote Nst1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Nanoarchaeota tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
archaeal histone Tax=CG_Woesearch_02
archaeal histone
rifcsphigho2_02_scaffold_16394_3
unknown

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1437..1874
DNA (438bp) protein (146aa)

This feature has no annotations

rifcsphigho2_02_scaffold_16394_4

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1893..2141
DNA (249bp) protein (83aa)
AbrB family transcriptional regulator id=5044588 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
AbrB family transcriptional regulator {ECO:0000313|EMBL:KHO46322.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
AbrB family transcriptional regulator
rifcsphigho2_02_scaffold_16394_5
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(2732..3397)
DNA (666bp) protein (222aa)
Ribosomal protein L31e n=1 Tax=uncultured marine crenarchaeote AD1000-325-A12 RepID=B3V5Q9_9ARCH id=5103296 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
RPL31A; 50S ribosomal protein L31; K02910 large subunit ribosomal protein L31e Tax=CG_Woesearch_01
Ribosomal protein L31e
rifcsphigho2_02_scaffold_16394_6

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comp(3756..4430)
DNA (675bp) protein (225aa)
30S ribosomal protein S19e {ECO:0000256|HAMAP-Rule:MF_01474}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
30S ribosomal protein S19; K02966 small subunit ribosomal protein S19e id=5049179 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
ribosomal protein S19e
rifcsphigho2_02_scaffold_16394_7
RLO_RIF02_62_27, RIF2, Bacteria

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comp(4749..6011)
DNA (1263bp) protein (421aa)
endonuclease/exonuclease/phosphatase; K06896 Tax=RIFCSPLOWO2_12_FULL_RIF02_62_27_curated
rifcsphigho2_02_scaffold_16394_8
CG_Woesearch_03, Woesearchaeota, Archaea

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6267..8384
DNA (2118bp) protein (706aa)
Xylose isomerase-like, TIM barrel domain Tax=CG_Woesearch_03
Putative uncharacterized protein id=5800820 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_02_scaffold_16394_9
AR11, Woesearchaeaota, DPANN, Archaea

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8523..9257
DNA (735bp) protein (245aa)
Putative uncharacterized protein Tax=AR11
Displaying 9 items

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