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rifcsphigho2_02_scaffold_1834

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_1834_1
unknown

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comp(83..313)
DNA (231bp) protein (77aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1834_2
Methanolobus tindarius, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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541..1014
DNA (474bp) protein (158aa)
UPI0003D1C6F9 related cluster n=1 Tax=unknown RepID=UPI0003D1C6F9
Transcriptional regulator {ECO:0000313|EMBL:ETA67883.1}; TaxID=1090322 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanolobus.;" source="Methanolobus tin
putative transcriptional regulator
rifcsphigho2_02_scaffold_1834_3
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(1091..2044)
DNA (954bp) protein (318aa)
calcium/cation antiporter; K07301 inner membrane protein Tax=CG_Woesearch_02
K+-dependent Na+/Ca+ exchanger related-protein id=5800688 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
calcium/cation antiporter
rifcsphigho2_02_scaffold_1834_4
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(2187..4871)
DNA (2685bp) protein (895aa)
cation-transporting ATPase A (EC:3.6.3.10); K01537 Ca2+-transporting ATPase [EC:3.6.3.8] Tax=CG_Woesearch_02
Calcium-translocating P-type ATPase, PMCA-type n=1 Tax=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) RepID=A8F3V6_THELT
calcium-translocating P-type ATPase
rifcsphigho2_02_scaffold_1834_5
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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5066..5587
DNA (522bp) protein (174aa)
Putative uncharacterized protein n=1 Tax=Candidatus Parvarchaeum acidophilus ARMAN-5 RepID=D6GV66_9EURY
hypothetical protein Tax=RBG_16_Euryarchaeota_41_19_curated
hypothetical protein
rifcsphigho2_02_scaffold_1834_6

Not on your lists

comp(5590..6351)
DNA (762bp) protein (254aa)
Modification methylase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.113 {ECO:0000256|RuleBase:RU362026};; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
Site-specific DNA-methyltransferase (Adenine-specific) n=2 Tax=Mobiluncus curtisii RepID=D6ZH52_MOBCV id=5103177 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Site-specific DNA-methyltransferase Adenine-specific
rifcsphigho2_02_scaffold_1834_7
AR20, Woesearchaeaota, DPANN, Archaea

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comp(6359..6538)
DNA (180bp) protein (60aa)
hypothetical protein
id=5103575 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR20
rifcsphigho2_02_scaffold_1834_8
unknown

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6656..7534
DNA (879bp) protein (293aa)
Putative transposase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IND8_NITGG id=5102900 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Putative transposase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IND8_NITGG Tax=AR20
hypothetical protein
rifcsphigho2_02_scaffold_1834_9
unknown

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comp(7531..8031)
DNA (501bp) protein (167aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1834_10
CG_Woesearch_01, Woesearchaeota, Archaea

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8562..9371
DNA (810bp) protein (270aa)
pheromone shutdown-related protein TraB Tax=CG_Woesearch_01
TraB family protein id=5049565 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
TraB family protein
rifcsphigho2_02_scaffold_1834_11
CG_Pacearch_03, Pacearchaeota, Archaea

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comp(9628..10737)
DNA (1110bp) protein (370aa)
cyclopropane-fatty-acyl-phospholipid synthase; K00574 cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] Tax=CG_Pacearch_03
cyclopropane-fatty-acyl-phospholipid synthase (EC:2.1.1.79)
Methyltransferase, cyclopropane fatty acid synthase id=4029127 bin=GWC2_Syntrophus__56_31 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
rifcsphigho2_02_scaffold_1834_12
Poecilia formosa, Poecilia, Cyprinodontiformes, Neopterygii, Chordata, Metazoa

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comp(10880..11932)
DNA (1053bp) protein (351aa)
PREDICTED: cyclic nucleotide-gated channel cone photoreceptor subunit alpha-like n=1 Tax=Oryzias latipes RepID=UPI0002A486F6
cyclic nucleotide-gated channel cone photoreceptor subunit alpha-like
Uncharacterized protein {ECO:0000313|Ensembl:ENSPFOP00000001388}; TaxID=48698 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neotele
rifcsphigho2_02_scaffold_1834_13
Drosophila ananassae, Drosophila, Diptera, Neoptera, Arthropoda, Metazoa

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12036..13604
DNA (1569bp) protein (523aa)
GF10639 n=1 Tax=Drosophila ananassae RepID=B3M5R4_DROAN
GF10639 gene product from transcript GF10639-RA; K14571 ribosome biogenesis ATPase
GF10639 {ECO:0000313|EMBL:EDV40698.1}; TaxID=7217 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroid
rifcsphigho2_02_scaffold_1834_14
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

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13720..13986
DNA (267bp) protein (89aa)
Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
rifcsphigho2_02_scaffold_1834_15
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

13996..15471
DNA (1476bp) protein (492aa)
cysS; Cysteinyl-tRNA synthetase (EC:6.1.1.16); K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] Tax=CG_Woesearch_02
cysteinyl-tRNA synthetase (EC:6.1.1.16)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037DD3C6
rifcsphigho2_02_scaffold_1834_16
RBG_13_WOR_2_41_10_curated, WOR-2, Bacteria

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comp(15738..15869)
DNA (132bp) protein (44aa)
hypothetical protein Tax=RBG_13_WOR_2_41_10_curated
rifcsphigho2_02_scaffold_1834_17
unknown

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comp(16163..17287)
DNA (1125bp) protein (375aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1834_18

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comp(17565..17852)
DNA (288bp) protein (96aa)
Marine sediment metagenome DNA, contig: S01H1_S13048 {ECO:0000313|EMBL:GAG01406.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
rifcsphigho2_02_scaffold_1834_19
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

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18255..18989
DNA (735bp) protein (245aa)
Glycosyl transferase family protein n=1 Tax=mine drainage metagenome RepID=T1CAA7_9ZZZZ
hypothetical protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
hypothetical protein
rifcsphigho2_02_scaffold_1834_20
unknown

Not on your lists

19107..20036
DNA (930bp) protein (310aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1834_21
RBG_13_OP11_40_15_curated, Microgenomates, Bacteria

Not on your lists

comp(20269..20835)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2A3X4_9BACT
Uncharacterized protein Tax=RBG_13_OP11_40_15_curated
rifcsphigho2_02_scaffold_1834_22
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(20861..22585)
DNA (1725bp) protein (575aa)
dolichyl-phosphate-mannose-protein mannosyltransferase (EC:2.4.1.109)
Uncharacterized protein id=5800035 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein Tax=AR15
rifcsphigho2_02_scaffold_1834_23
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

comp(22569..24932)
DNA (2364bp) protein (788aa)
hypothetical protein Tax=CG_Woesearch_03
cytoplasmic protein id=15193062 bin=GWC2_NOV_55_46 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_NOV_55_46 organism_group=Proteobacteria
hypothetical protein
rifcsphigho2_02_scaffold_1834_24
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

comp(25005..25640)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QGH1_9EURY id=5103319 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Tax=CG_Woesearch_03
rifcsphigho2_02_scaffold_1834_25
unknown

Not on your lists

comp(25646..26908)
DNA (1263bp) protein (421aa)
Glycosyltransferase involved in cell wall biogenesis n=1 Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QGH0_9EURY id=5103318 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Glycosyltransferase involved in cell wall biogenesis n=1 Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QGH0_9EURY Tax=AR20
Glycosyltransferase involved in cell wall biogenesis
rifcsphigho2_02_scaffold_1834_26
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(27016..28542)
DNA (1527bp) protein (509aa)
hypothetical protein
id=5050180 Tax=CG_Woesearch_02
id=5050180 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsphigho2_02_scaffold_1834_27
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(28654..30162)
DNA (1509bp) protein (503aa)
Uncharacterized protein Tax=CG_Woesearch_02
Uncharacterized protein id=5050179 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsphigho2_02_scaffold_1834_28

Not on your lists

30377..31177
DNA (801bp) protein (267aa)
DNA repair and recombination protein RadB n=1 Tax=nanoarchaeote Nst1 RepID=R1G2W9_9ARCH
DNA repair and recombination protein RadB {ECO:0000256|HAMAP-Rule:MF_00350}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
radB; DNA repair and recombination protein RadB
rifcsphigho2_02_scaffold_1834_29

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comp(31363..31947)
DNA (585bp) protein (195aa)
rps2P; 30S ribosomal protein S2; K02967 small subunit ribosomal protein S2 id=5050177 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
30S ribosomal protein S2 {ECO:0000256|SAAS:SAAS00084186}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
30S ribosomal protein S2
rifcsphigho2_02_scaffold_1834_30
unknown

Not on your lists

32247..32327
DNA (81bp) protein (27aa)

This feature has no annotations

Displaying 30 items

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