ggKbase home page

rifcsphigho2_02_scaffold_6061

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_6061_1

Not on your lists

comp(1..984)
DNA (984bp) protein (328aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL17097.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
rifcsphigho2_02_scaffold_6061_trna_2
unknown

Not on your lists

comp(1062..1177)
DNA (116bp)
transferRNA
rifcsphigho2_02_scaffold_6061_2
unknown

Not on your lists

1659..1883
DNA (225bp) protein (75aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6061_trna_1
unknown

Not on your lists

comp(1887..2003)
DNA (117bp)
transferRNA
rifcsphigho2_02_scaffold_6061_3
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(2153..2662)
DNA (510bp) protein (170aa)
id=5041691 Tax=CG_Woesearch_01
rifcsphigho2_02_scaffold_6061_4

Not on your lists

comp(2664..3200)
DNA (537bp) protein (179aa)
Marine sediment metagenome DNA, contig: S01H1_S08790 {ECO:0000313|EMBL:GAG12683.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
id=5041691 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsphigho2_02_scaffold_6061_5
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

comp(3200..3766)
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000369275E
id=5041692 Tax=CG_Woesearch_03
rifcsphigho2_02_scaffold_6061_6
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(3819..4370)
DNA (552bp) protein (184aa)
Putative signal transduction protein with CBS domains n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GXK7_METFV
putative signal transduction protein with CBS domains Tax=CG_Woesearch_02
signal transduction protein with cbs domains
rifcsphigho2_02_scaffold_6061_7
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(4581..6458)
DNA (1878bp) protein (626aa)
hypothetical protein Tax=CG_Woesearch_02
hypothetical protein id=5047130 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Minimal nucleotidyltransferase fused to HEPN protein
rifcsphigho2_02_scaffold_6061_8
unknown

Not on your lists

6596..7381
DNA (786bp) protein (262aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6061_9
unknown

Not on your lists

7545..8978
DNA (1434bp) protein (478aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6061_10
unknown

Not on your lists

comp(8975..9796)
DNA (822bp) protein (274aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6061_11

Not on your lists

comp(9793..16629)
DNA (6837bp) protein (2279aa)
Fibronectin type III protein {ECO:0000313|EMBL:KHO51501.1}; Flags: Fragment;; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
fibronectin type III domain-containing protein id=15190463 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
fibronectin type III domain-containing protein
rifcsphigho2_02_scaffold_6061_12
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(17010..18881)
DNA (1872bp) protein (624aa)
hypothetical protein
hypothetical protein Tax=AR11
id=5103088 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rifcsphigho2_02_scaffold_6061_13
unknown

Not on your lists

comp(19020..19853)
DNA (834bp) protein (278aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6061_14
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(19855..21078)
DNA (1224bp) protein (408aa)
hypothetical protein Tax=AR11
Displaying 16 items

View Taxonomy