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rifcsphigho2_02_scaffold_15000

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_15000_1

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384..602
DNA (219bp) protein (73aa)
Uncharacterized protein {ECO:0000313|EMBL:AJF61064.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
id=5799733 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_02_scaffold_15000_2
unknown

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comp(566..688)
DNA (123bp) protein (41aa)

This feature has no annotations

rifcsphigho2_02_scaffold_15000_3
Methanothermus fervidus, Methanothermus, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(827..1798)
DNA (972bp) protein (324aa)
N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00150}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_00150};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_00150};; N-acetyl-glutamate semiald
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GWN8_METFV
rifcsphigho2_02_scaffold_15000_4
RBG_16_RIF03_38_10_curated, RIF03, Bacteria

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comp(1788..2969)
DNA (1182bp) protein (394aa)
acetylornithine/succinyldiaminopimelate aminotransferase (EC:2.6.1.11); K00821 acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] Tax=RBG_16_RIF03_38_10_curated
argD; acetylornithine aminotransferase (EC:2.6.1.11)
Acetylornithine aminotransferase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HQQ7_9FIRM
rifcsphigho2_02_scaffold_15000_5
CG_Micra_01, Micraarchaeota, Archaea

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comp(2969..3844)
DNA (876bp) protein (292aa)
acetylglutamate kinase; K00930 acetylglutamate kinase [EC:2.7.2.8] Tax=CG_Micra_01
Acetylglutamate kinase n=1 Tax=Thermoanaerobacter ethanolicus JW 200 RepID=F1ZU57_THEET
acetylglutamate kinase
rifcsphigho2_02_scaffold_15000_6
Desulfotomaculum ruminis, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3807..4973)
DNA (1167bp) protein (389aa)
Arginine biosynthesis bifunctional protein ArgJ n=1 Tax=Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL) RepID=F6DPH2_DESRL rbh
arginine biosynthesis bifunctional protein ArgJ
Arginine biosynthesis bifunctional protein ArgJ {ECO:0000256|HAMAP-Rule:MF_01106}; TaxID=696281 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="De
rifcsphigho2_02_scaffold_15000_7
CG_Desulfob_01, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4977..6320)
DNA (1344bp) protein (448aa)
argininosuccinate lyase (EC:4.3.2.1); K01755 argininosuccinate lyase [EC:4.3.2.1] Tax=CG_Desulfob_01
argininosuccinate lyase (EC:4.3.2.1)
Argininosuccinate lyase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CE80_THET1
rifcsphigho2_02_scaffold_15000_8
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

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comp(6322..7245)
DNA (924bp) protein (308aa)
ornithine carbamoyltransferase family protein; K00611 ornithine carbamoyltransferase [EC:2.1.3.3] Tax=GWF2_Lentisphaerae_57_35_curated
ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase family protein id=4214053 bin=GWF2_Lentisphaerae_57_35 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
rifcsphigho2_02_scaffold_15000_9
CG_Wirth_01, Wirthbacteria, Bacteria

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comp(7242..8420)
DNA (1179bp) protein (393aa)
argininosuccinate synthase (EC:6.3.4.5); K01940 argininosuccinate synthase [EC:6.3.4.5] Tax=CG_Wirth_01
argininosuccinate synthase (EC:6.3.4.5)
argininosuccinate synthase n=1 Tax=Dyella japonica RepID=UPI00030AEB3B
rifcsphigho2_02_scaffold_15000_10
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

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8533..9162
DNA (630bp) protein (210aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR78594.1}; TaxID=1618734 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_40_9.;"
Conserved archaeal protein, aspartokinase domain protein id=5800470 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsphigho2_02_scaffold_15000_11
Carboxydothermus hydrogenoformans, Carboxydothermus, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(9159..9749)
DNA (591bp) protein (197aa)
Riboflavin biosynthesis protein RibBA n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=Q3AC29_CARHZ
ribBA; 3,4-dihydroxy-2-butanone 4-phosphate synthase
Riboflavin biosynthesis protein RibBA {ECO:0000256|HAMAP-Rule:MF_01283, ECO:0000256|SAAS:SAAS00280052}; TaxID=246194 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobact
Displaying 11 items

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