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rifcsphigho2_02_scaffold_4891

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_4891_1

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219..884
DNA (666bp) protein (222aa)
Nitroreductase {ECO:0000313|EMBL:KHO49696.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
nitroreductase id=5044666 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
nitroreductase family protein
rifcsphigho2_02_scaffold_4891_2
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(1086..2165)
DNA (1080bp) protein (360aa)
cell division protein FtsZ; K03531 cell division protein FtsZ Tax=CG_Woesearch_01
cell division protein FtsZ; K03531 cell division protein FtsZ id=5044675 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Cell division protein FtsZ
rifcsphigho2_02_scaffold_4891_3
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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3380..4342
DNA (963bp) protein (321aa)
Histone deacetylase superfamily n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L482_HALH1
histone deacetylase superfamily protein Tax=RBG_13_Pacearchaeota_36_9_curated
histone deacetylase superfamily protein
rifcsphigho2_02_scaffold_4891_4
GWA2_OD1_49_9, Parcubacteria, Bacteria

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comp(4339..5235)
DNA (897bp) protein (299aa)
Branched-chain amino acid aminotransferase n=1 Tax=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) RepID=C6BXI7_DESAD
Uncharacterized protein {ECO:0000313|EMBL:KKW10595.1}; TaxID=1618852 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_49_9.;"
branched-chain amino acid aminotransferase
rifcsphigho2_02_scaffold_4891_5

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comp(5237..6028)
DNA (792bp) protein (264aa)
inorganic polyphosphate/ATP-NAD kinase; K00858 NAD+ kinase [EC:2.7.1.23] id=5048517 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
NAD+ kinase {ECO:0000313|EMBL:KHO45551.1}; EC=2.7.1.23 {ECO:0000313|EMBL:KHO45551.1};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
inorganic polyphosphate/ATP-NAD Kinase
rifcsphigho2_02_scaffold_4891_6
RLO_PLX_64_10, Bacteria

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6116..7051
DNA (936bp) protein (312aa)
Ribonucleoside hydrolase n=3 Tax=Pasteurella haemolytica RepID=S5FG31_PASHA
inosine-uridine preferring nucleoside hydrolase Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
rihB; ribonucleoside hydrolase
rifcsphigho2_02_scaffold_4891_7
unknown

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comp(7054..7296)
DNA (243bp) protein (81aa)

This feature has no annotations

rifcsphigho2_02_scaffold_4891_8
unknown

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comp(7326..7628)
DNA (303bp) protein (101aa)

This feature has no annotations

rifcsphigho2_02_scaffold_4891_9
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7632..9236)
DNA (1605bp) protein (535aa)
hypothetical protein n=1 Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B53F1A
metal dependent phosphohydrolase
HD superfamily phosphohydrolase {ECO:0000313|EMBL:ERH13084.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HB67.;"
rifcsphigho2_02_scaffold_4891_10
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(9276..10163)
DNA (888bp) protein (296aa)
2-dehydropantoate 2-reductase (EC:1.1.1.169); K00077 2-dehydropantoate 2-reductase [EC:1.1.1.169] Tax=RBG_13_Bathyarchaeota_46_16b_curated
2-dehydropantoate 2-reductase (EC:1.1.1.169)
2-dehydropantoate 2-reductase (EC:1.1.1.169); K00077 2-dehydropantoate 2-reductase [EC:1.1.1.169] id=5240910 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_02_scaffold_4891_11
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(10329..12800)
DNA (2472bp) protein (824aa)
leucyl-tRNA synthetase (EC:6.1.1.9); K01869 leucyl-tRNA synthetase [EC:6.1.1.4] Tax=CG_Woesearch_02
Leucine--tRNA ligase n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=SYL_ALKMQ id=5102912 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Leucine-tRNA ligase
rifcsphigho2_02_scaffold_4891_12

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13023..13478
DNA (456bp) protein (152aa)
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
30S ribosomal protein S15/S13e id=5799745 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rps15p; 30S ribosomal protein S15P
rifcsphigho2_02_scaffold_4891_13
AR11, Woesearchaeaota, DPANN, Archaea

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comp(13481..14431)
DNA (951bp) protein (317aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2 2.7.7.8); K02945 small subunit ribosomal protein S1; K03527 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [EC:1.17.1.2] Tax=AR11
ispH; hydroxymethylbutenyl pyrophosphate reductase (EC:1.17.1.2)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Clostridium sp. CAG:440 RepID=R7GFG3_9CLOT
rifcsphigho2_02_scaffold_4891_14
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14452..15318)
DNA (867bp) protein (289aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:M
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VI78_CLOBI
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
rifcsphigho2_02_scaffold_4891_15
CG_Desulfarul_01, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(15340..16320)
DNA (981bp) protein (327aa)
ACP S-malonyltransferase (EC:2.3.1.39); K00645 [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] Tax=CG_Desulfarul_01
Malonyl CoA-acyl carrier protein transacylase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UYX4_ROSS1
malonyl CoA-acyl carrier protein transacylase
rifcsphigho2_02_scaffold_4891_16
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

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comp(16357..17499)
DNA (1143bp) protein (381aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:2.7.7.60 4.6.1.12); K12506 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:2.7.7.60 4.6.1.12] id=5090670 bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000313|EMBL:KKR78760.1}; Flags: Fragment;; TaxID=1618734 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacte
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
rifcsphigho2_02_scaffold_4891_17
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

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comp(17602..18753)
DNA (1152bp) protein (384aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QRH0_ACEAZ rbh
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000313|EMBL:KKR78761.1}; TaxID=1618734 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_40_9.;"
rifcsphigho2_02_scaffold_4891_18
unknown

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comp(18799..18867)
DNA (69bp) protein (23aa)

This feature has no annotations

Displaying 18 items

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